Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= AAMG01001645.1 Length=355 Score E Sequences producing significant alignments: (Bits) Value seq7850 425 1e-116 >seq7850 Length=6177 Score = 425 bits (470), Expect = 1e-116 Identities = 306/353 (87%), Gaps = 0/353 (0%) Strand=Plus/Plus Query 3 GACGAACTGGCGCCGCAGCATGTGAAAGTGCCGTCGGGCTCGTCGGTGCGCCTGGACTAC 62 ||||| ||||||||||| ||| |||| ||||||||||||||||||||||| ||||||||| Sbjct 4646 GACGAGCTGGCGCCGCACCATCTGAAGGTGCCGTCGGGCTCGTCGGTGCGGCTGGACTAC 4705 Query 63 AGCGAACAGCCGCCGATCCTGGCGGTGCGCCTGCAGGAATTGTTCGGCCTGGCGGACACA 122 ||||| ||||||||||| |||||||||||| |||||||||||||||| ||||||||||| Sbjct 4706 AGCGAGCAGCCGCCGATTCTGGCGGTGCGCTTGCAGGAATTGTTCGGGCTGGCGGACACC 4765 Query 123 CCGCGCATTGCCGGCGGGCGCCAGGTGGTCAAGTTGCACCTGCTGTCCCCGTCGCGCAGG 182 || || |||||||||||||| |||||||||||| |||||||| |||| ||| | | || Sbjct 4766 CCACGGATTGCCGGCGGGCGGCAGGTGGTCAAGCTGCACCTGTTGTCGCCGGCCAGACGG 4825 Query 183 CCGGTGCAGGTGACCCAGGATCTGGCGAACTTCTGGCGCAGTACCTACGCCGAGGTGAAG 242 || ||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct 4826 CCCGTGCAGGTGACGCAGGACCTGGCGAACTTCTGGCGCAGTACTTACGCCGAGGTGAAG 4885 Query 243 AAGGATCTGAAGGGGCGGTATCCGAAGCATTATTGGCCGGATGATCCGTTGGTGGCCGAA 302 |||||| |||||||||| ||||| |||||||| |||||||||||||||||| | || ||| Sbjct 4886 AAGGATTTGAAGGGGCGATATCCCAAGCATTACTGGCCGGATGATCCGTTGATTGCTGAA 4945 Query 303 GCGACGGCGCGGATCAAACCCCGTAAGTAGCAACGACGGAGATCAACTGTGGG 355 |||| || |||||||| || | ||||| || || ||||| | |||||| Sbjct 4946 CCGACTGCCCGGATCAAGCCGAGAAAGTAAGTACATCGCAGATCTAATGTGGG 4998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1033192627232