Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= AAMG01001671.1 Length=306 Score E Sequences producing significant alignments: (Bits) Value seq5660 367 2e-99 >seq5660 Length=3846 Score = 367 bits (406), Expect = 2e-99 Identities = 265/306 (87%), Gaps = 0/306 (0%) Strand=Plus/Minus Query 1 CGAGGGTCTCAAGCGCGACCACCTGCTGGGCACCACCACCTGCGTCAAGGTGGAGCTCTA 60 |||||| || ||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct 3673 CGAGGGACTGAAGCGCGACAACCTGCTGGGCGCCACCACCTGCGTCAAGGTGGAGCTCTA 3614 Query 61 TGGCTCGTTGGGCGCCACTGGCAAAGGCCACGGCAGCGACAAGGCCATGTTGCTGGGCCT 120 ||||| | |||||||| ||||||||||||||||| ||||||||| | ||| ||||||| Sbjct 3613 CGGCTCACTCGGCGCCACCGGCAAAGGCCACGGCAGTGACAAGGCCGTATTGTTGGGCCT 3554 Query 121 GGAAGGCGAACACCCCGACACCGTGAATACCGAAACCGTGGCTGCCCGCCTGGCGCAGAT 180 ||||||||| ||||| || |||||||| ||||||||||| || ||||||||| | | || Sbjct 3553 GGAAGGCGAGCACCCGGATACCGTGAACACCGAAACCGTTGCCGCCCGCCTGTTGGAAAT 3494 Query 181 GCGCAAGGACGGCCGCCTGAATTTGCTCGGTGAACACAGCATTGCGTTCAACGAGAAAGA 240 ||| ||| ||| |||| ||||||| ||||||||||||||||||||||||||||| Sbjct 3493 TCGCGGCAACGCACGCTTGAACCTGCTCGGCGAACACAGCATTGCGTTCAACGAGAAAGA 3434 Query 241 ACACCTGGCGATGATCCGCAAACCCCTCGCCTACCATCCCAACGGCATGATCTTTCGTGC 300 ||||||||||||||| ||||||||||| |||| |||||||||||||||||||| || || Sbjct 3433 ACACCTGGCGATGATTCGCAAACCCCTGCCCTATCATCCCAACGGCATGATCTTCCGCGC 3374 Query 301 TTTCGA 306 ||||| Sbjct 3373 CTTCGA 3368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 876454426816