Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= AAMG01001688.1 Length=394 Score E Sequences producing significant alignments: (Bits) Value seq8871 517 3e-144 >seq8871 Length=16953 Score = 517 bits (572), Expect = 3e-144 Identities = 351/394 (89%), Gaps = 0/394 (0%) Strand=Plus/Minus Query 1 CGATGGTCAGCAACTCGCCGCCCACCTGGGTCCACGCCAGGCCAGTGACCTGACCGACTT 60 ||||||||||||| |||||||||||||||||||||||||||||||||||||| || || | Sbjct 5807 CGATGGTCAGCAATTCGCCGCCCACCTGGGTCCACGCCAGGCCAGTGACCTGGCCTACCT 5748 Query 61 GATCCTGCTGCTCGGCCAGGCCGTAGCTGAATTTGCGCACGCCGAGGAAGTGCTCCAGGG 120 | ||||||||||| ||||||||||||| ||||||||||||||| |||||||| ||||| Sbjct 5747 GGTCCTGCTGCTCAGCCAGGCCGTAGCGGAATTTGCGCACGCCCAGGAAGTGTTCCAGCA 5688 Query 121 AGTCGGCCGTGACCTTCACCGAGAAGCGTTTTTCCAGCGCATGTTCCTTGACCGCCTTGC 180 ||| || ||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct 5687 GGTCCGCGGTGACCTTCACCGAGAAGCGTTTTTCCAGCGCATGTTCCTTCACGGCCTTGC 5628 Query 181 GGCAGATCTTCGCGATCTGGCGCTCCAGGCCACGCACACCGGCTTCGCGGGTGTAGTAGC 240 ||||||||||||| | || ||||| ||||| || |||||||| |||||||||||| | | Sbjct 5627 GGCAGATCTTCGCCAGTTGACGCTCAAGGCCCCGTACACCGGCCTCGCGGGTGTAGAAAC 5568 Query 241 GGACGATGTCGCGGATCGTGCCGACTTCAAATTCGATCTCGCCCTTCTTCAGGCCATTGG 300 | | |||||||||||||| | || | | ||||||||||||||| || |||||||| |||| Sbjct 5567 GAATGATGTCGCGGATCGCGTCGGCATTAAATTCGATCTCGCCTTTTTTCAGGCCGTTGG 5508 Query 301 CCGAAATCTGCTTGGGCGCGAGGTACTTGATGGCGATGTTGATCTTCTCGTCTTCGGTGT 360 ||| |||||||||||||| |||||| |||| ||||||||||||||||||||| ||||||| Sbjct 5507 CCGCAATCTGCTTGGGCGAGAGGTATTTGACGGCGATGTTGATCTTCTCGTCCTCGGTGT 5448 Query 361 AACCCGGCAGGCGAATCACTTCCATCCGGTCCAG 394 |||||||||| |||||||| |||||||||||||| Sbjct 5447 AACCCGGCAGACGAATCACCTCCATCCGGTCCAG 5414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1157943439808