Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= AAMG01001745.1 Length=273 Score E Sequences producing significant alignments: (Bits) Value seq1644 277 3e-72 >seq1644 Length=7499 Score = 277 bits (306), Expect = 3e-72 Identities = 225/273 (82%), Gaps = 0/273 (0%) Strand=Plus/Minus Query 1 TCGGGGCCACGGCCCCAATGCGGTACCTGGGGCACCAACCGCCATTGATCGGGCACAGAT 60 |||| ||| ||||||||| |||| | | | ||| || ||||| | |||| ||| | Sbjct 7318 TCGGCGCCTCGGCCCCAAAACGGTCCATCGCGCAGCACCCGCCCTGAATCGCATACATGT 7259 Query 61 CCAGACGCGTGCCGGCATACACCACCGGGGCGCCCGGTTGCGCGGCATCCAGCGTGCGCG 120 |||| ||||||||||||||||||||||| ||||| || || ||||| ||||| || |||| Sbjct 7258 CCAGCCGCGTGCCGGCATACACCACCGGCGCGCCGGGCTGGGCGGCGTCCAGGGTTCGCG 7199 Query 121 CGGTGGCACAGCCGGTGAGTTGCAGCGCCATCAAGAGCAGCAGTGCTTTATTCATCGCCG 180 | || ||||| ||||| ||||||||||||| || | || || | |||||||||| | | Sbjct 7198 CAGTCGCACACCCGGTCAGTTGCAGCGCCAGCAGCACCATCAATAGTTTATTCATCACTG 7139 Query 181 CCCAGGTGGTGCTCACCCCAACGTGGCAGCATGTCCTGGGGAATGTTCAACAGGTTGAGA 240 | || |||||||| ||||| || ||||||||||||||||||||||||| |||||||||| Sbjct 7138 CTCAAATGGTGCTCGCCCCAGCGCGGCAGCATGTCCTGGGGAATGTTCAGCAGGTTGAGA 7079 Query 241 ATGCGCGCCACCACAAAGTCCACCAGGTCATCG 273 || |||||||||||||||||||||||||||||| Sbjct 7078 ATCCGCGCCACCACAAAGTCCACCAGGTCATCG 7046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 774104323674