Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= AAMG01001757.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq39408 448 1e-123 >seq39408 Length=3467 Score = 448 bits (496), Expect = 1e-123 Identities = 344/415 (83%), Gaps = 0/415 (0%) Strand=Plus/Plus Query 1 CGACGTTCGGGCTCTGGAAGCCGACGTCATAGATGTGGAAGCCCAAGTGCATGATCTTCT 60 ||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct 2977 CGACGTTGGGGCTCTGGAAGCCGACGTCATAGATATGGAAGCCCAGATGCATGATCTTCT 3036 Query 61 GGTCCAGGTGCAGGTAGGGGTAGTTCCCGTCCACTGGCAGCGACGGCGCCAGCTTCACNN 120 ||||||| |||||||| |||||||| |||||||| ||||||||||||||||| ||||| Sbjct 3037 GGTCCAGATGCAGGTACGGGTAGTTGCCGTCCACCGGCAGCGACGGCGCCAGTTTCACCA 3096 Query 121 NNNNNNNNNNNNNNNNNNNCGCCACTTCACCGGCAGCGCGGGCCACGGCGAGGATCATGC 180 ||||||||||||||| ||||||||||||||||||||||||| Sbjct 3097 CACCCACCAGCATCAGCGGCGCCACTTCACCGGCGGCGCGGGCCACGGCGAGGATCATGC 3156 Query 181 CGGTCGTCATGGCCGGGCTTGCCATGGGCAAGACGATCTTCCACAGCGTCTCGGCCTTGG 240 ||||| |||| |||||||| ||||| |||| ||||||||||||||||| || ||||||| Sbjct 3157 CGGTCATCATCGCCGGGCTGGCCATCGGCAGCACGATCTTCCACAGCGTTTCCGCCTTGG 3216 Query 241 TCGCGCCCAAGGCCAGCGAGCCCTCGCGCACGGTACGCGGAATACGCGCCAAACCTTCTT 300 ||||||||| |||| || || || || ||||| || ||||| ||||||| ||||||| Sbjct 3217 TCGCGCCCAGTGCCAAAGAACCTTCACGTACGGTGCGAGGAATCCGCGCCAGGCCTTCTT 3276 Query 301 CGGTGGCCACGATCACCACCGGAACAGCCAGCAGTGCCAGGGTCAACGATGCCCACAGCA 360 | |||||||||||||||||||| || |||||||| |||||||||| |||||||| |||| Sbjct 3277 CAGTGGCCACGATCACCACCGGTACCGCCAGCAGCGCCAGGGTCAGGGATGCCCAGAGCA 3336 Query 361 GGTCCGGGGTACCCAAGGTCGGCGCCGGCAGTGCTTCGGGGAAGACCAAGCGGTC 415 || | || ||||| |||||||| ||||||| || |||| ||||| || ||||| Sbjct 3337 GGCCAGGCGTACCAAAGGTCGGTGCCGGCAAGGCCTCGGCGAAGAACAGCCGGTC 3391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241110648192