Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= AAMG01001766.1 Length=199 Score E Sequences producing significant alignments: (Bits) Value seq15238 89.7 6e-16 seq23276 87.8 2e-15 seq25904 86.0 7e-15 seq8413 84.2 2e-14 seq14062 80.6 3e-13 seq22732 78.8 1e-12 seq38733 75.2 1e-11 seq23279 75.2 1e-11 seq8939 75.2 1e-11 seq17686 73.4 4e-11 seq7850 73.4 4e-11 >seq15238 Length=18460 Score = 89.7 bits (98), Expect = 6e-16 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 18 GGGATGGCATCGACTCGGTGCATCTGATACATCGAGTCGCCCGCATCGCAGGCAAGCCAG 77 ||||||||||| |||||||| |||||||| ||||| ||| |||||||||||||||||| Sbjct 2488 GGGATGGCATCACCTCGGTGCGACTGATACACCGAGTTGCCTGCATCGCAGGCAAGCCAG 2429 Query 78 CTCCCAC 84 ||||||| Sbjct 2428 CTCCCAC 2422 >seq23276 Length=22433 Score = 87.8 bits (96), Expect = 2e-15 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 20 GATGGCATCGACTCGGTGCATCTGATACATCGAGTCGCCCGCATCGCAGGCAAGCCAGCT 79 ||||||||| ||||||| | |||||||| ||||| | |||||||||||||||||||||| Sbjct 16701 GATGGCATCACCTCGGTGTACCTGATACACCGAGTTGTCCGCATCGCAGGCAAGCCAGCT 16642 Query 80 CCCACA 85 |||||| Sbjct 16641 CCCACA 16636 >seq25904 Length=36391 Score = 86.0 bits (94), Expect = 7e-15 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 17 AGGGATGGCATCGACTCGGTGCATCTGATACATCGAGTCGCCCGCATCGCAGGCAAGCCA 76 || ||| ||||| ||||||||| ||||||||||||| | | ||||||||||||||||| Sbjct 33959 AGCGATAACATCGCCTCGGTGCAACTGATACATCGAGGTGTCTGCATCGCAGGCAAGCCA 34018 Query 77 GCTCCCACAC 86 |||||||||| Sbjct 34019 GCTCCCACAC 34028 >seq8413 Length=4298 Score = 84.2 bits (92), Expect = 2e-14 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 20 GATGGCATCGACTCGGTGCATCTGATACATCGAGTCGCCCGCATCGCAGGCAAGCCAGCT 79 ||| ||||| ||||||| | |||||||| |||| ||| |||||||||||||||||||| Sbjct 1507 GATAGCATCACCTCGGTGTAACTGATACACCGAGGTGCCGGCATCGCAGGCAAGCCAGCT 1566 Query 80 CCCACACAAGC 90 |||||| |||| Sbjct 1567 CCCACAGAAGC 1577 >seq14062 Length=17457 Score = 80.6 bits (88), Expect = 3e-13 Identities = 59/69 (86%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 20 GATGGCATCGACTCGGTGCATCTGATACATCGAGTCGCCCGCATCGCAGGCAAGCCAGCT 79 |||||||||| ||||||| | |||||| || | || ||||||||||||||||||||| Sbjct 970 GATGGCATCGCCTCGGTGTGGCAGATACACCGCGGGGCGCGCATCGCAGGCAAGCCAGCT 1029 Query 80 CCCACACAA 88 ||||||||| Sbjct 1030 CCCACACAA 1038 >seq22732 Length=19314 Score = 78.8 bits (86), Expect = 1e-12 Identities = 57/66 (86%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 20 GATGGCATCGACTCGGTGCATCTGATACATCGAGTCGCCCGCATCGCAGGCAAGCCAGCT 79 |||||||||| ||||||| ||||| | |||| |||| |||||||||||||||||||| Sbjct 7050 GATGGCATCGCCTCGGTGTATCTGGAGGAACGAGGCGCCTGCATCGCAGGCAAGCCAGCT 7109 Query 80 CCCACA 85 |||||| Sbjct 7110 CCCACA 7115 >seq38733 Length=7181 Score = 75.2 bits (82), Expect = 1e-11 Identities = 56/66 (85%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 20 GATGGCATCGACTCGGTGCATCTGATACATCGAGTCGCCCGCATCGCAGGCAAGCCAGCT 79 |||||||||| |||||| | |||||| |||||| || || ||||||||||||||||| Sbjct 3800 GATGGCATCGCCTCGGTCTGGCAGATACACCGAGTCACCTGCGTCGCAGGCAAGCCAGCT 3859 Query 80 CCCACA 85 |||||| Sbjct 3860 CCCACA 3865 >seq23279 Length=11070 Score = 75.2 bits (82), Expect = 1e-11 Identities = 61/73 (84%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 20 GATGGCATCGACTCGGTGCATCTGATACATCGAGTCGCCCGCATCGCAGGCAAGCCAG-C 78 ||| ||||| ||||||||| |||| ||| |||| ||| ||||||| |||||||| | | Sbjct 1483 GATAGCATCACCTCGGTGCAACTGACACACCGAGGTGCCTGCATCGCGGGCAAGCCCGAC 1542 Query 79 TCCCACACAAGCC 91 ||||||||||||| Sbjct 1543 TCCCACACAAGCC 1555 >seq8939 Length=17737 Score = 75.2 bits (82), Expect = 1e-11 Identities = 58/69 (84%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 20 GATGGCATCGACTCGGTGCATCTGATACATCGAGTCGCCCGCATCGCAGGCAAGCCAGCT 79 ||||||||| |||||| | |||| | | ||||| ||| |||||||||||||||||||| Sbjct 5822 GATGGCATCACTTCGGTGTACCTGAAAGACCGAGTTGCCAGCATCGCAGGCAAGCCAGCT 5763 Query 80 CCCACACAA 88 |||||| || Sbjct 5762 CCCACAGAA 5754 >seq17686 Length=21765 Score = 73.4 bits (80), Expect = 4e-11 Identities = 55/65 (85%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 20 GATGGCATCGACTCGGTGCATCTGATACATCGAGTCGCCCGCATCGCAGGCAAGCCAGCT 79 |||||||||||||| | | |||| | | ||||||| | |||||||||||||||||||| Sbjct 5802 GATGGCATCGACTCAATACCACTGACAGACCGAGTCGACTGCATCGCAGGCAAGCCAGCT 5743 Query 80 CCCAC 84 ||||| Sbjct 5742 CCCAC 5738 >seq7850 Length=6177 Score = 73.4 bits (80), Expect = 4e-11 Identities = 66/82 (80%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 20 GATGGCATCGACTCGGTGCATCTGATACATCGAGTCGCCCGCATCGCAGGCAAGCCAG-C 78 ||||||||| |||||| || |||| | |||| ||| ||||||| |||||||| | | Sbjct 5014 GATGGCATCACCTCGGTCTGTCGGATAGACCGAGGTGCCTGCATCGCGGGCAAGCCCGGC 5073 Query 79 TCCCACACAAGCCAGTGCCCAC 100 ||||||||||||||| ||||| Sbjct 5074 TCCCACACAAGCCAGCTCCCAC 5095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 537394737096