Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= AAMG01001997.1 Length=304 Score E Sequences producing significant alignments: (Bits) Value seq25038 159 6e-37 >seq25038 Length=5438 Score = 159 bits (176), Expect = 6e-37 Identities = 125/143 (87%), Gaps = 5/143 (3%) Strand=Plus/Plus Query 1 CCGCATCGTCAAACGCAGGGAACTTCGCCAGCTTCCATTCGGTTCCCCGAGTTTCttttt 60 ||||||||||||| ||||||||||| ||||| ||||||| |||| ||||||||| |||| Sbjct 5294 CCGCATCGTCAAATGCAGGGAACTT-GCCAG-TTCCATT-GGTTACCCGAGTTTAATTTT 5350 Query 61 ttttCGCAAGCGGGCCAATCGTTGGCCACGCGACA-GGGCATTCAAGCAGTTGAAATTAG 119 ||| |||||||||||||||||||||||||| | | |||||||||||||| || |||||| Sbjct 5351 TTT-CGCAAGCGGGCCAATCGTTGGCCACGACAGAGGGGCATTCAAGCAGATGGAATTAG 5409 Query 120 AAAATGCGCTCTAAACAGCAAGA 142 ||||||| | |||| ||||||| Sbjct 5410 AAAATGCCCACTAATGAGCAAGA 5432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 870056949248