Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= AAMG01002003.1 Length=209 Score E Sequences producing significant alignments: (Bits) Value seq2449 131 2e-28 >seq2449 Length=9428 Score = 131 bits (144), Expect = 2e-28 Identities = 148/192 (77%), Gaps = 5/192 (3%) Strand=Plus/Minus Query 3 AACAGCACGCGCACGTAGCGGCCCGAGGTCTTCGGGGCCGGTCCACAGGCCACCGGCGGC 62 || |||| |||||||||| ||| |||||| | ||||| | |||||| ||||||||| || Sbjct 2024 AAGAGCATGCGCACGTAGTGGCT-GAGGTCCTTGGGGCTGCTCCACAAGCCACCGGCCGC 1966 Query 63 GAGGTCACGCACCCGGGGGTCGGTGCCGGCCTTCGCCATCCTCGTAGCCGTGGGCGCGAT 122 ||||| |||||| ||| ||||| || | | | ||| || | || || |||||||| Sbjct 1965 AAGGTCGCGCACCTGGGCGTCGGCGCTGACGGT-GCCGTCTGCATAACCCCGGGCGCGAA 1907 Query 123 AGCTCATTTCGCGCACCGGTACCCAGGAAACTCGGACTGGTTCATTTCGCAAGGGTGTGA 182 ||| | || |||| ||||| || | ||| |||| |||||||||| || || ||| ||| Sbjct 1906 AGCCCGGTT-GCGCGCCGGTGCCGACGAAGCTCG-ACTGGTTCATCTC-CAGGGGCTTGA 1850 Query 183 GCAGGCTGCTTT 194 |||||||||||| Sbjct 1849 GCAGGCTGCTTT 1838 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569382519066