Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= AAMG01002049.1 Length=571 Score E Sequences producing significant alignments: (Bits) Value seq7854 681 0.0 >seq7854 Length=2611 Score = 681 bits (754), Expect = 0.0 Identities = 494/568 (87%), Gaps = 4/568 (1%) Strand=Plus/Plus Query 4 TCGACCGTCGAGTTCAGGTCGTTCCGGGTCAAGGTCGGCCAGGGCTTCCTGATGATCTTC 63 |||||| ||| |||| ||||||||||||||| ||| |||| ||||||||||||||||||| Sbjct 1272 TCGACCATCGTGTTCTGGTCGTTCCGGGTCATGGTGGGCCTGGGCTTCCTGATGATCTTC 1331 Query 64 ACCGGTCTAGTTCAGCCAGTGGCTAGCGCCGGGGCGACAAGATGTACACGTCCAAGCCGT 123 ||||| || |||||||| ||||| |||||| |||||||||||||||||||||||||||| Sbjct 1332 ACCGGCCT-GTTCAGCCTCTGGCT-GCGCCGTGGCGACAAGATGTACACGTCCAAGCCGT 1389 Query 124 TCCTGTACCTGGCGTTGTGGATGGGCCCGTCCGGGTTGATCGCGATTCTCGCCGGCTGGT 183 |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1390 TCCTGTACCTGGCGCTGTGGATGGGCCCGTCCGGCCTGATCGCGATTCTCGCCGGCTGGT 1449 Query 184 TCACCACGGAAATCGGCCGTCAGCCGTGGGTGGTCTACGGCCTGATGCGCACGGCGGATG 243 ||||||| || ||||||||||||||||||||||||||||| |||||||||||||| || | Sbjct 1450 TCACCACCGAGATCGGCCGTCAGCCGTGGGTGGTCTACGGGCTGATGCGCACGGCAGACG 1509 Query 244 CGTCCTCCGGGCATAGCCTGGTGCAGATGACGATTACGCTGGTGTTGTTCGTGGTGGTGT 303 | || ||| || || | | |||||||| |||||| |||||||||| |||||||||| Sbjct 1510 CCTCGTCCAACCACAGTTTTGCGCAGATGAGCATTACGTTGGTGTTGTTTGTGGTGGTGT 1569 Query 304 ACTTCGCGCTGTTCGGTGCCGGTCTGGGCTACATGATGCGCCTGGTGCGCAAAGGTCCGC 363 ||||||||||||| || || || |||||||||||||||||||||||||||||||| || Sbjct 1570 ACTTCGCGCTGTTTGGCGCGGGCCTGGGCTACATGATGCGCCTGGTGCGCAAAGGGCCTG 1629 Query 364 AGACCCACGAAGGCGATGAGCCGACCCACGGTGGTCCTGGCCAGAAACGCACGCCAGCCC 423 |||||||||| || ||||| ||||||||||| ||||| ||||||||||| || |||| Sbjct 1630 TGACCCACGAAAGCACCGAGCCCACCCACGGTGGCCCTGGGCAGAAACGCACACCGGCCC 1689 Query 424 GTCCGTTGTCTGCCGCCGATGATGGCAGCGATGACGACCACACCCACATCCAGCACAAGG 483 |||||||||| || || ||||| | ||||| ||| ||| | ||| | | |||||| Sbjct 1690 GTCCGTTGTCGGCGGCTGATGACAGTGCCGATGCCGATCACGGCGACACCTTGAACAAGG 1749 Query 484 GGCATTGAG--ATGGGTATTGATCTTCCGCTGATCCGGGCCGTGATCATCATCTTCGGCA 541 || | |||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1750 GGAACTGAGCCATGGGTATTGATCTTCCGCTGATCTGGGCCGTGATCATCATCTTCGGCA 1809 Query 542 TCATGATGTACGTGGTCATGGACGGCTT 569 |||||||||||||||||||||| ||||| Sbjct 1810 TCATGATGTACGTGGTCATGGATGGCTT 1837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1724120204576