Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= AAMG01002062.1 Length=351 Score E Sequences producing significant alignments: (Bits) Value seq2304 342 1e-91 >seq2304 Length=9586 Score = 342 bits (378), Expect = 1e-91 Identities = 297/369 (80%), Gaps = 20/369 (5%) Strand=Plus/Plus Query 1 ACCAGGTCACCATCGTCGGCGCCGAATGCCGACCACGGTGCCGGTGTACCAGCGGGGTGA 60 |||||||| || ||||| ||||||| ||| |||||||||||||| ||||||||||||| Sbjct 7268 ACCAGGTCGCCGTCGTCAGCGCCGA-TGCTCACCACGGTGCCGGTC-ACCAGCGGGGTGA 7325 Query 61 TTTCCACCACGTCGCCGTTCACATAGGCGTCATCGGTGCTTTCATTGAAGCGCCCGTAGA 120 |||||||||||| |||||| || |||||||| ||||||||||| ||||||| || || | Sbjct 7326 TTTCCACCACGTTGCCGTTGACGTAGGCGTCGTCGGTGCTTTCGCTGAAGCGACCATACA 7385 Query 121 ACTCATACCAGGCCCACACGCCCACCACACTGAGGATGACGATCAGCGCCAGGCCGATCA 180 | || ||||| |||||||||||| | | ||||||||||||||||||||| | | || Sbjct 7386 ATTCGTACCAACCCCACACGCCCAAGGCGCCGAGGATGACGATCAGCGCCAGCACAAACA 7445 Query 181 GCATCACTTTGCGTTTGCGCGGGTTGGTGTCTTTGGGTTGTTCGGTC------------- 227 |||| ||||||||||||||||||||| || ||||||||||| | | Sbjct 7446 GCATGACTTTGCGTTTGCGCGGGTTGCTGGTGTTGGGTTGTTCAGCCTTGTTTGTTTCAG 7505 Query 228 --GCGTTGGTGCT---TTCGGCAGTGGCCATGACAAATACCTCAAATTATTCCGTGCGTG 282 |||||| |||| |||||||||||||||||||| ||||| |||||||| ||||| | Sbjct 7506 GAGCGTTGTTGCTGGTTTCGGCAGTGGCCATGACAAGTACCTTGAATTATTCAGTGCGCG 7565 Query 283 TTGCGGGGGTGGTCGCGGCCACGCTGTTGGCGTGATACCCGCCACCCAGGGCCTGCATCA 342 | || |||||||||| ||||||| | | |||||| | ||||| |||||||||||||||| Sbjct 7566 TGGCTGGGGTGGTCGAGGCCACGTTATCGGCGTGGAAACCGCCGCCCAGGGCCTGCATCA 7625 Query 343 ATTGAATCG 351 |||||||| Sbjct 7626 GTTGAATCG 7634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1020397672096