Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= AAMG01002083.1 Length=362 Score E Sequences producing significant alignments: (Bits) Value seq6160 176 1e-41 >seq6160 Length=28301 Score = 176 bits (194), Expect = 1e-41 Identities = 263/366 (72%), Gaps = 8/366 (2%) Strand=Plus/Plus Query 1 CGAGGCCAGCGACGAGGCACGTACTCACCATTGGCGCTGTGGCAATGACATTGCCCACAG 60 ||| |||||||| || || || || ||| |||||||| ||||| || || |||||||| Sbjct 17789 CGACGCCAGCGATGAAGCCCGCACCACCCACTGGCGCTGCGGCAACGATATCGCCCACAG 17848 Query 61 CTTGCAGGTAGCTGGGTTCAAGGGCCGCTTCCAGATGCTCAGCGACCCACTGTGCATGGG 120 | || || || ||||||||||||||||||| |||||| | |||||| |||||||||| Sbjct 17849 CCTGGGCGTGGCGGGGTTCAAGGGCCGCTTCCGGATGCTGATTGACCCATTGTGCATGGG 17908 Query 121 CCCCGTACGCAATCTTCCCAG-CGCCGAATTCC--GCCGCCTGCGCAGCGCTTTTATCAG 177 ||| || | | ||| || | || ||| || |||| | |||||| | |||||| Sbjct 17909 CCCGGTGCAGGA-CTTGCCTGCCGAGCAATACCAGGCCG--TTCGCAGCCGCTATATCAG 17965 Query 178 CCAGACTTTTGCCTTGACCCCTGCTGATGTAAACCTGCGCGTTGACGGGGAATA-CACCC 236 |||| |||||| || || || || | || || | ||||| |||| Sbjct 17966 CCAGGTGTTTGCCATGGATGAGGCCGAAGTGGCGCGCCGGCATGCGGACGAATATCACCA 18025 Query 237 AATTGGACGCACTGGCCGGCGCCGAACATAGCGTGTTGTGGTGTGAAGCGGATGCCTATG 296 ||| || ||||| | |||||| || ||||||||||||||||| |||||||| || | Sbjct 18026 TCTTGAAC-AACTGGGCAGCGCCGGCCACAGCGTGTTGTGGTGTGAGGCGGATGCGTACG 18084 Query 297 ACCAATTGTTCCTGATTCGCGCACTCTCAAGTCTTGAACGCACGCCGAAAAAACTTGAGC 356 | || ||||||||||||||||| || | | ||||| | ||| ||||||| ||| Sbjct 18085 ATCAGTTGTTCCTGATTCGCGCGCTGGCTGGGCTTGAGCATCTGCCTGAAAAACTGGAGT 18144 Query 357 TGATCG 362 |||||| Sbjct 18145 TGATCG 18150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1055583798720