Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= AAMG01002120.1 Length=347 Score E Sequences producing significant alignments: (Bits) Value seq6147 394 2e-107 >seq6147 Length=18753 Score = 394 bits (436), Expect = 2e-107 Identities = 268/299 (90%), Gaps = 4/299 (1%) Strand=Plus/Plus Query 49 TTCACCGTGGTTGCCCTCGGCGTTGTTCAGGCCGAACAGGCGCTCCTTGATGATTCCATC 108 ||| |||||||||||||||||||||||||||||||||||||| ||||||||||| | || Sbjct 2257 TTCGCCGTGGTTGCCCTCGGCGTTGTTCAGGCCGAACAGGCGTTCCTTGATGATCGCGTC 2316 Query 109 GCGCTCGTTCCACAGGGCCAGGCCCAGGCACCAACGTTGCGCCTTGTCACTGAACCCCGC 168 ||||||||||||||| ||||||||||||||||| || || |||||||| ||||| ||||| Sbjct 2317 GCGCTCGTTCCACAGCGCCAGGCCCAGGCACCAGCGCTGGGCCTTGTCGCTGAAGCCCGC 2376 Query 169 CAGGCCGTCCTCGCCCCAACGGTAGGCGCGGCTGCGTGCATGGTCATGGGGGAAGTAGGC 228 |||||| ||||||||||| ||||||||||||||||| ||||| || |||||||||||| Sbjct 2377 CAGGCCATCCTCGCCCCAGCGGTAGGCGCGGCTGCGGGCATGTTCGTGGGGGAAGTAGCG 2436 Query 229 CCAGGCGTCGCCATCGGCGCTGTAGTCTTCGCGCACCGTGCCCCATTGGCGTTCGCTCAG 288 |||||| ||||| ||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 2437 CCAGGCATCGCCGTCGGCGCTGTAGTCTTCGCGCACCGTGCCCCATTGCCGCTCGCTCAG 2496 Query 289 GTAGGGGCCCCACTCGCGCCAGCGCTCGGCGTC--GCTGGTTGCCAGGCGTTGGCCTTC 345 |||||||||||| || |||||||||||| |||| ||| | |||||||| |||||||| Sbjct 2497 GTAGGGGCCCCAGTCACGCCAGCGCTCGCCGTCAGGCT--TGGCCAGGCGCTGGCCTTC 2553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1007602716960