Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq9892 215 1e-53 >seq9892 Length=17670 Score = 215 bits (238), Expect = 1e-53 Identities = 305/422 (72%), Gaps = 24/422 (6%) Strand=Plus/Plus Query 5 TTTACAACCC-GAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63 |||||||||| || ||||||| || | ||||||||||||||| |||||||||||||||| Sbjct 9804 TTTACAACCCTGAGGGCCTTCATCCTGCACGCGGCATGGCTGGTTCAGGCTTGCGCCCAT 9863 Query 64 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 123 || |||||||||| ||||||||||||||||||||||||| |||| ||||||| |||||| Sbjct 9864 TGACCAATATTCCCTACTGCTGCCTCCCGTAGGAGTCTGGCCCGTATCTCAGTGCCAGTG 9923 Query 124 TGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCC 183 ||| | || |||||||||| | ||| |||||||||| ||| ||| ||||| || Sbjct 9924 TGGGGGATCTTCCTCTCAGAACCCCTACCCATCGTCGCCTTGGTAAGCCGTTACCTTACC 9983 Query 184 AACTAGCTAATCCCATCTGGGTTCAT-CCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTT 242 ||||||||||| ||| ||| | || || ||| ||| | || || | Sbjct 9984 AACTAGCTAAT------GGGGCGCATGCTCATCTTGTACCGCCGGAACTTTCCTCT-TAA 10036 Query 243 GGTCTTGC--------GACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCT 294 | | ||| || |||| |||||| |||||||| | | ||||| || Sbjct 10037 TGACATGCGTCAAAAAGAGCATATGGAGTATTAATTCCCGTTTCCGGAAGCTATCCTCCA 10096 Query 295 CCATCAGGCAGTTTCCCAGAC--ATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCA 352 | ||| || || || || |||| ||||||| |||| ||| |||| | || | Sbjct 10097 GTACAAGGTAGATT-GCATACGTGTTACGCACCCGTTCGCCGGTCGCCAGC--AACACCG 10153 Query 353 AGCTGCTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTG 412 | || ||||| | || ||||||||||||| | ||||||||||| |||||||| ||| Sbjct 10154 AAGTG--TCCTGCTGCCCCTCGACTTGCATGTATGAGGCCTGCCGCTAGCGTTCATCCTG 10211 Query 413 AG 414 || Sbjct 10212 AG 10213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1221918215488