Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq9892 338 2e-90 >seq9892 Length=17670 Score = 338 bits (374), Expect = 2e-90 Identities = 270/325 (83%), Gaps = 0/325 (0%) Strand=Plus/Minus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 |||| |||||||||| |||||||||||||||||||||||| |||| || ||||||||||| Sbjct 9745 AAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTATCCG 9686 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132 || |||||||| ||||||||||||||| || | ||||||||| |||||||| || | Sbjct 9685 GATTTACTGGGTTTAAAGGGTGCGTAGGCGGCATTTTAAGTCAGTGGTGAAAGCCTGGCG 9626 Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAAT 192 || ||| || | | ||| |||| |||| | ||| |||| || || || ||| |||| Sbjct 9625 CTTAACGCCAGAAATGCCATTGATACTGATGTGCTTGAGTCAAGAAGAGGTAAGCAGAAT 9566 Query 193 TCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTT 252 || | ||||||||||||||||| |||||| | |||||| ||| | |||||||| |||| Sbjct 9565 TCATGGTGTAGCGGTGAAATGCATAGATACCATGAGGAATTCCAATAGCGAAGGCCGCTT 9506 Query 253 GCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 312 |||| || |||||| ||||||| |||||||||||||||| ||||||||||||||||| Sbjct 9505 ACTGGTCTTGTACTGACGCTGAGGCACGAAAGCGTGGGGAGCGAACAGGATTAGATACCC 9446 Query 313 TGGTAGTCCACGCCGTAAACGATGA 337 ||||||||||||||||||||||||| Sbjct 9445 TGGTAGTCCACGCCGTAAACGATGA 9421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1202725782784