Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq32221 98.7 2e-18 seq24242 98.7 2e-18 seq700 95.1 2e-17 seq12232 91.5 3e-16 seq378 91.5 3e-16 seq12175 87.8 3e-15 seq28968 86.0 1e-14 seq14005 86.0 1e-14 seq37336 82.4 1e-13 seq11677 80.6 5e-13 seq28064 78.8 2e-12 seq21584 78.8 2e-12 seq14530 78.8 2e-12 seq15862 77.0 6e-12 seq31426 75.2 2e-11 seq18452 75.2 2e-11 seq28170 73.4 7e-11 seq3486 73.4 7e-11 seq1050 73.4 7e-11 >seq32221 Length=6483 Score = 98.7 bits (108), Expect = 2e-18 Identities = 98/125 (78%), Gaps = 3/125 (2%) Strand=Plus/Minus Query 207 TGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCA 266 |||| |||||| | || | ||||||| || |||| || |||||| | ||| ||| | Sbjct 4880 TGGGAAATCTTTTGAACTTGTGTCGTGATGAGGATCGATGATTGCAGTCATTCTCCTTGA 4821 Query 267 ACGAGGAATGCCTAGTAAGCGCGTGTCATCAGC--ACGCGTTGATTACGT-CCCTGCCCT 323 | ||||||||||||||| |||| ||||||||| |||| ||||||||| ||||||| | Sbjct 4820 ATGAGGAATGCCTAGTAGGCGCAGGTCATCAGCATACGCACTGATTACGTCCCCTGCCAT 4761 Query 324 TTGTA 328 ||||| Sbjct 4760 TTGTA 4756 >seq24242 Length=1394 Score = 98.7 bits (108), Expect = 2e-18 Identities = 161/232 (69%), Gaps = 14/232 (6%) Strand=Plus/Minus Query 111 GAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGA 170 ||| ||||| |||||||||||||| | || ||| || |||||||||||| |||| || Sbjct 1049 GAGCCAATAGCAGGTCTGTGATGCTCCTAATTGTCCTAGGCCGCACGCGCACTACTACGA 990 Query 171 CAGAGCCAACGAGTTCATCACCT------------TGGCCGGAAGGTC-TGGGTAATCTT 217 | | | |||||| | || || | | |||| | |||| |||||| Sbjct 989 CGCATCGAACGAGCTTTTCGGCTACTTATCTAAGCTATCTTGAAGATAATGGGAAATCTT 930 Query 218 GTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGC 277 | | | |||||| || |||| || |||||||||||| ||| | ||||||||| Sbjct 929 TTGAGCTTGCGTCGTGATGAGGATCGATGATTGCAATTATTCTCCTTGCATGAGGAATGC 870 Query 278 CTAGTAAGCGCGTGTCATCAGCACGCGTTG-ATTACGTCCCTGCCCTTTGTA 328 |||| |||||| |||| |||| || || | ||||||||||| |||||| Sbjct 869 CTAGCAAGCGCAAGTCAACAGCTTGCACTGTAACACGTCCCTGCCGTTTGTA 818 >seq700 Length=1106 Score = 95.1 bits (104), Expect = 2e-17 Identities = 96/123 (78%), Gaps = 3/123 (2%) Strand=Plus/Plus Query 209 GGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAAC 268 || |||||| | || | ||||||| || |||| || |||||| | ||| ||| || Sbjct 1 GGAAATCTTTTGAACTTGTGTCGTGATGAGGATCGATGATTGCAGTCATTCTCCTTGAAT 60 Query 269 GAGGAATGCCTAGTAAGCGCGTGTCATCAGC--ACGCGTTGATTACGT-CCCTGCCCTTT 325 ||||||||||||||| |||| ||||||||| |||| ||||||||| ||||||| ||| Sbjct 61 GAGGAATGCCTAGTAGGCGCAGGTCATCAGCATACGCACTGATTACGTCCCCTGCCATTT 120 Query 326 GTA 328 ||| Sbjct 121 GTA 123 >seq12232 Length=4030 Score = 91.5 bits (100), Expect = 3e-16 Identities = 155/220 (70%), Gaps = 11/220 (5%) Strand=Plus/Plus Query 103 GGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGC 162 ||||| ||| ||||| |||||||| |||| | || |||| || ||| |||||||| | Sbjct 705 GGAAGAGCGAGCCAATAGCAGGTCTG--ATGCTCCTAAATGTCCTAGGCTGCACGCGCAC 762 Query 163 TACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAG-GTCTGGGTAATCTTGTTA 221 ||||||||| | | | | | | | |||| ||| | |||| |||| | | | Sbjct 763 TACACTGACGCATTAA--GGCTACCT-ATCTTG-----AAGAGGATGGGAAATCCTTTGA 814 Query 222 AACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAG 281 | | |||||| || |||| || | |||||||||| ||| | ||||||||||||| Sbjct 815 ACTTGCGTCGTGATGAGGATCGATGAATGCAATTATTCTCCTTGCATGAGGAATGCCTAG 874 Query 282 TAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCC 321 || |||| ||||||||| || || || ||||||||| Sbjct 875 TAGGCGCAAGTCATCAGCTTGCACTGTATATGTCCCTGCC 914 >seq378 Length=3108 Score = 91.5 bits (100), Expect = 3e-16 Identities = 138/194 (71%), Gaps = 12/194 (6%) Strand=Plus/Minus Query 146 CTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA-CCTT--GGCCG--- 199 || ||| |||||||| |||||||||| | ||||||||| | |||| ||| Sbjct 834 CTAGGCTGCACGCGCACTACACTGACGCATTAAACGAGTTCGAGAGCCTTCCGGCTACCT 775 Query 200 -----GAAG-GTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAA 253 |||| | ||| |||||| | || | |||| | || |||| || ||||||| Sbjct 774 ATCTTGAAGAGGATGGAAAATCTTTTGAACTTGCGTCGCGATGAGGATCGACGATTGCAA 715 Query 254 TTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACG 313 ||||| ||| || ||||||||||||||| || || ||| ||||| || |||||||| Sbjct 714 TTATTCTCCTTGAATGAGGAATGCCTAGTAGGCTCGAGTCGTCAGCTTGCACTGATTACG 655 Query 314 TCCCTGCCCTTTGT 327 |||||||| || || Sbjct 654 TCCCTGCCATTCGT 641 >seq12175 Length=3494 Score = 87.8 bits (96), Expect = 3e-15 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 228 GTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCG 287 |||||| || |||| || ||||||| |||| ||| || ||||||||||||||| ||| Sbjct 93 GTCGTGATGAGGATCGATGATTGCAAGTATTCTCCTTGAATGAGGAATGCCTAGTAGGCG 152 Query 288 CGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | | ||||||| || |||| ||||||||||| |||||| Sbjct 153 CAAGCCATCAGCTTGCACTGATGACGTCCCTGCCATTTGTA 193 >seq28968 Length=3536 Score = 86.0 bits (94), Expect = 1e-14 Identities = 81/101 (80%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 227 TGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTC-AACGAGGAATGCCTAGTAAG 285 ||||||| || |||| || ||||||||| || ||||| || |||||||||||||| | Sbjct 2628 TGTCGTGATGAGGATCGATGATTGCAATTCTT-CTCTTTGAATGAGGAATGCCTAGTGGG 2686 Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTG 326 ||| ||||||||| || ||||||||||| |||| |||| Sbjct 2687 CGCAAGTCATCAGCTTGCACTGATTACGTCCGTGCCATTTG 2727 >seq14005 Length=1404 Score = 86.0 bits (94), Expect = 1e-14 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 247 ATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTT 306 |||||||||||| |||| | ||||||||||||||| |||| ||||||||| || | Sbjct 1170 ATTGCAATTATTCTTCTTGGATGAGGAATGCCTAGTAGGCGCAAGTCATCAGCTTGCACT 1229 Query 307 GATTACGTCCCTGCCCTTTGTA 328 |||| |||||||||| |||||| Sbjct 1230 GATTCCGTCCCTGCCATTTGTA 1251 >seq37336 Length=11388 Score = 82.4 bits (90), Expect = 1e-13 Identities = 89/117 (76%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 212 AATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAG 271 |||||| | || | |||||| || |||| || ||||| |||||| ||| || || Sbjct 801 AATCTTTTGAATTTGCGTCGTGATGAGGATCGATGATTGCCATTATTCTCCTTGAATAAG 860 Query 272 GAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||||||||||| |||| ||||||||| || ||| |||||||||| |||||||| Sbjct 861 AAATGCCTAGTAGGCGCAAGTCATCAGCTTGCACTGACTACGTCCCTG-CCTTTGTA 916 >seq11677 Length=12352 Score = 80.6 bits (88), Expect = 5e-13 Identities = 66/80 (83%), Gaps = 3/80 (4%) Strand=Plus/Minus Query 245 GCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCG 304 |||||||||||||| ||| |||||||||||||||| | |||| ||||||||| || Sbjct 2453 GCATTGCAATTATT---CTTGAACGAGGAATGCCTAGCAGGCGCAAGTCATCAGCTTGCA 2397 Query 305 TTGATTACGTCCCTGCCCTT 324 |||||| ||||||||| || Sbjct 2396 CTGATTATGTCCCTGCCATT 2377 >seq28064 Length=2334 Score = 78.8 bits (86), Expect = 2e-12 Identities = 78/101 (77%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 228 GTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCG 287 |||| | || |||| || |||||||||| | ||| || ||||||||||||||| ||| Sbjct 569 GTCGCGATGAGGATCGATGATTGCAATTACTCTCCTTGAATGAGGAATGCCTAGTAGGCG 628 Query 288 CGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | |||||| || || ||| |||||||||||| || ||| Sbjct 629 CAAGTCATCTGCTTGCACTGAATACGTCCCTGCCGTTAGTA 669 >seq21584 Length=1470 Score = 78.8 bits (86), Expect = 2e-12 Identities = 72/91 (79%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 238 GGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCA 297 |||| || |||||||||||| ||| | ||||||||||||||| | || ||||||| Sbjct 266 GGATCGATGATTGCAATTATTTTCCTTGAGTGAGGAATGCCTAGTAGGTGCAAGTCATCA 207 Query 298 GCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 || || |||| ||||||||||| |||||| Sbjct 206 GCTTGCACTGATGACGTCCCTGCCATTTGTA 176 >seq14530 Length=7206 Score = 78.8 bits (86), Expect = 2e-12 Identities = 75/95 (79%), Gaps = 1/95 (1%) Strand=Plus/Plus Query 235 TGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCG-TGTC 293 || |||| || |||||||||||| ||| || ||| ||||||| ||| ||||| ||| Sbjct 284 TGCGGATCGATGATTGCAATTATTCTCCTTGAATGAGAAATGCCTGGTAGGCGCGAAGTC 343 Query 294 ATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||||| || |||||||||||||||| ||||| Sbjct 344 ATCAGCTTGCACTGATTACGTCCCTGCCAGTTGTA 378 >seq15862 Length=3205 Score = 77.0 bits (84), Expect = 6e-12 Identities = 94/124 (76%), Gaps = 7/124 (6%) Strand=Plus/Minus Query 207 TGGGTAATCTTGTTAAACTCTG--TCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTT 264 |||| |||||| || |||| || | ||| || |||| || ||||||||| || ||| Sbjct 154 TGGGAAATCTT-TTGAACT-TGCATTGTGATGAGGATCGATGATTGCAATTGTTCTCCTT 97 Query 265 CAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTT 324 || |||||||||| || |||| | ||||||| || |||||||||||||||| || Sbjct 96 GAATGAGGAATGCCCAG---GCGCAAGCCATCAGCTTGCACTGATTACGTCCCTGCCATT 40 Query 325 TGTA 328 |||| Sbjct 39 TGTA 36 >seq31426 Length=4093 Score = 75.2 bits (82), Expect = 2e-11 Identities = 78/101 (77%), Gaps = 1/101 (1%) Strand=Plus/Minus Query 228 GTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCG 287 |||||| || ||| || ||||| ||||| ||| || ||| ||||||||||| ||| Sbjct 3410 GTCGTGGTGAGGACCGACGATTGCT-TTATTCTCCTTGAATGAGAAATGCCTAGTAGGCG 3352 Query 288 CGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | ||||||||| || |||| ||||||||||| |||||| Sbjct 3351 CAAGTCATCAGCTTGCACTGATCACGTCCCTGCCATTTGTA 3311 >seq18452 Length=1038 Score = 75.2 bits (82), Expect = 2e-11 Identities = 64/79 (81%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309 ||||||||| ||| || ||||||| ||||||| |||| ||||||||| || | || Sbjct 363 GCAATTATTCTCCTTGAATGAGGAATACCTAGTAGGCGCAAGTCATCAGCTTGCACTCAT 304 Query 310 TACGTCCCTGCCCTTTGTA 328 |||||||||||| |||||| Sbjct 303 TACGTCCCTGCCATTTGTA 285 >seq28170 Length=5426 Score = 73.4 bits (80), Expect = 7e-11 Identities = 64/79 (81%), Gaps = 2/79 (3%) Strand=Plus/Plus Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308 |||||||||| ||| || |||||||||||||| | ||| ||||||||| || ||| Sbjct 4 TGCAATTATTCTCCTTGAATGAGGAATGCCTAGT--GGGCGAGTCATCAGCTTGCACTGA 61 Query 309 TTACGTCCCTGCCCTTTGT 327 ||||||||||||| || || Sbjct 62 TTACGTCCCTGCCATTCGT 80 >seq3486 Length=1192 Score = 73.4 bits (80), Expect = 7e-11 Identities = 85/108 (79%), Gaps = 5/108 (5%) Strand=Plus/Minus Query 212 AATCTTGTTAAACTCT-GTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTC-AACG 269 |||||| ||||||| |||| | || |||| || |||||||||||| ||||| || | Sbjct 1151 AATCTT-TTAAACTTGCGTCGCGATGAGGATCGATGATTGCAATTATT-CTCTTTGAATG 1094 Query 270 AGGAA-TGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCC 316 ||||| ||||||||| |||| ||| |||| ||| ||||||||||| Sbjct 1093 AGGAAATGCCTAGTAGGCGCAAGTCGTCAGTTTGCGCTGATTACGTCC 1046 >seq1050 Length=1379 Score = 73.4 bits (80), Expect = 7e-11 Identities = 78/99 (79%), Gaps = 3/99 (3%) Strand=Plus/Plus Query 230 CGTGCTGGGGATAGAGCATTGCAA-TTATTGCTCTTCA-ACGAGGAATGCCTAGTAAGCG 287 |||| || |||| || ||||||| ||||| ||||| | ||||||||||| ||| ||| Sbjct 625 CGTGATGAGGATCGATGATTGCAAATTATT-CTCTTTGCATGAGGAATGCCTTGTAGGCG 683 Query 288 CGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTG 326 | ||||||||| | |||||||||||||||| |||| Sbjct 684 CAAGTCATCAGCTTACACTGATTACGTCCCTGCCATTTG 722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946826680064