Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= AAMG01002205.1 Length=300 Score E Sequences producing significant alignments: (Bits) Value seq16948 434 2e-119 >seq16948 Length=8766 Score = 434 bits (480), Expect = 2e-119 Identities = 263/277 (95%), Gaps = 1/277 (0%) Strand=Plus/Minus Query 24 TTCGATCACGTCATGCAGCATCGCGGCCATCAGGCTCTGAAGGTCCATGTGCACGTCGGC 83 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct 5133 TTCGATCACGTCATGCAGCATCGCGGCCATCAGGCTCTGATGGTCCATGTGCATGTCGGC 5074 Query 84 AAGAATATTCGGCCACCGCAAGAGGATGGGTGACATACGCCTCGCCACTACGTCGGCGTT 143 ||||||||| |||||| ||||||||||| |||||||||||||||||||| || ||||||| Sbjct 5073 AAGAATATT-GGCCACGGCAAGAGGATGCGTGACATACGCCTCGCCACTGCGGCGGCGTT 5015 Query 144 GGCCGTCGTGGGCTTGTTCGGCGTAGAAATACGCTCGGCGAACCAGGTTGACCTGGTCTG 203 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 5014 GGCCGTCGTGGGCTTGTTCGGCGTAGAAATACGCTCGGCGGACCAGGTTGACCTGGTCTG 4955 Query 204 CGCCGAGGTAGGCCGATAAGCGATCGGCGAGGGCGTCTATGCTCGGCAAAGTGTGAACTC 263 ||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct 4954 GGCCGAGGTAGGTCGATAAGCGATCGGCGAGGGCGTCTATGCTCGGCAAAGTATTAACTC 4895 Query 264 CTGCCGATGGCTGTGACCCCGCGCCGTGCTACGTCGA 300 |||||| |||||||||||||| ||||||||||||||| Sbjct 4894 CTGCCGTTGGCTGTGACCCCGTGCCGTGCTACGTCGA 4858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 857261994112