Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq5967 75.2 2e-11 seq36289 73.4 6e-11 >seq5967 Length=1163 Score = 75.2 bits (82), Expect = 2e-11 Identities = 67/84 (80%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 32 TGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGC 91 |||| | ||||| ||| || | | |||||||| || ||||||| | | ||||||||||| Sbjct 260 TGGTATCTGCGGTTGTTCGATCGGACAGTGCCGTGATGCTACCACCAGATGGATTATGGC 319 Query 92 TGAACGCCTCTAAGTCAGAATCCA 115 |||||||| |||| ||||| ||| Sbjct 320 TGAACGCCATTAAGCCAGAACCCA 343 >seq36289 Length=1337 Score = 73.4 bits (80), Expect = 6e-11 Identities = 74/94 (79%), Gaps = 2/94 (2%) Strand=Plus/Plus Query 31 TTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGC-TGGATTATG 89 ||||| | | ||| ||| || | | |||||||| || ||||||| ||| ||||||||| Sbjct 739 TTGGTATCTACGGTTGTTCGATCGGACAGTGCCGTGATGCTACCA-CTGTATGGATTATG 797 Query 90 GCTGAACGCCTCTAAGTCAGAATCCATGCCAGAA 123 ||||||||||||| || ||||| ||| | |||| Sbjct 798 GCTGAACGCCTCTGAGCCAGAACCCAGTCTAGAA 831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 818887218432