Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq26061 273 2e-68 seq34427 134 1e-26 >seq26061 Length=1673 Score = 273 bits (302), Expect = 2e-68 Identities = 592/869 (68%), Gaps = 19/869 (2%) Strand=Plus/Plus Query 61059 CGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTC 61118 ||| |||||||||||| || | ||| || |||| |||||||| ||||| || || Sbjct 401 CGTCTTGTTCCCCATCCAGCACCCGGACATCTGGCAGATGTACAAGGCCGCGGAGGCCTC 460 Query 61119 CTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGCGTTT-AT 61177 ||||||||||| || ||||| || || | ||| |||| ||||||||| | | | Sbjct 461 ATTCTGGACGGTCGAAGAGGTTGACCTGGCGGCCGACCTGAAGGACTGGGAGGGCCTCAA 520 Query 61178 CGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTA 61237 ||| ||| || | ||| ||||| | || || | |||||||| |||||||| ||||| | Sbjct 521 CGA-CGGGGAGCGACACTTCATCACCCACGTCCTCGCGTTCTTCGCCGCTTCCGACGGCA 579 Query 61238 TCGTCAATGAGAATTTA--TTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCG 61295 ||||| ||||| | || | || ||| | | || | || | | ||||| || Sbjct 580 TCGTCCTCGAGAACCTCGCTTCG--CGGTTCATGAACGACATCCAGATCCCCGAGGCCCG 637 Query 61296 TTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCT 61355 || |||||||| |||||||| || || || || |||| || |||| ||||||| | || Sbjct 638 GTGCTTCTACGGGTTCCAGATCGCGATCGAAAACATCCATTCCGAGACGTACAGTCTGCT 697 Query 61356 CATCGATACGTACATCAGGGAGCGGGCGGAACGTGA-ACGATTGTTCAATGCCATCGAGA 61414 |||||| |||||||||| | | || ||| || ||| | |||||| || ||| || Sbjct 698 CATCGACACGTACATCAAGAACAACGCCGAAAAAGACACGCT-GTTCAAGGCGATCTCGA 756 Query 61415 CGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGG 61474 || | ||| || | | ||| || || |||||| |||| |||||| ||| | | Sbjct 757 CGGTGCCGTGCGTCACGAAGAAGGCCGAGTGGGCCATCAAGTGGATCGGCAGCTCC---G 813 Query 61475 CTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGAT 61534 | || || | || | | | || || || | ||| ||||| | || ||| || | Sbjct 814 CCACGTTCGCGGAGAGGCTCGTCGCGTTCGCAGCGGTGGAGGGCATCTTCTTCTCCGGGT 873 Query 61535 CGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCA 61594 |||| | | ||||| ||| ||||||| || || || ||||| || ||||| |||| | Sbjct 874 CGTTCTGCTCGATCTTCTGGCTGAAGAAGCGGGGGCTGATGCCGGGGCTGACGTTCACGA 933 Query 61595 ATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAA-A 61653 | |||| || || || |||||||||||||| || || || || |||| | ||| | Sbjct 934 ACGAGTACATCTCCCGAGACGAGGGCATGCACTGCGACTTCGCCTGCCTGCTCTACAACA 993 Query 61654 CGCTATCTGGTGAATCGTCCGTCGGA-GGAGCGTGTGGGTGAGATTG-TTCGTGAGGCGG 61711 || || || | || | | ||||||||| |||| |||| || ||||| | Sbjct 994 AGC--TCGAGTACACACGCCTCAGCAGGGAGCGTGT-GGTGGAATTGCTTGCGGAGGCTG 1050 Query 61712 TAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATT 61771 || | ||||| |||| ||| | || ||||| |||| ||| || ||||| ||||| Sbjct 1051 TAGCCATCGAGAAGGAGTTTGTAACGGACGCACTGCCGGTCAAGCTGATCGGGATGAACA 1110 Query 61772 GTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGAT-TTGGGT 61830 | | || ||| || |||| || || || || |||||| ||||| || | | || | Sbjct 1111 GCGACCTGATGGCGAAGTACATCGAGTTCGTGTGCGACCGACTGTTCGTGACTCTCGGCT 1170 Query 61831 ATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGAT 61890 | | || | ||| || ||| ||||| || || |||||||| | || || ||| | Sbjct 1171 ACG-AGAAGTACTACAACACGGCGAACCCGTTCGACTTCATGGAGCTCATCTCCCTGCAA 1229 Query 61891 GGCAAGACGAATTTTTTCGAGAAACGTGT 61919 |||||||| || || ||||| || || || Sbjct 1230 GGCAAGACAAACTTCTTCGAAAAGCGCGT 1258 >seq34427 Length=4033 Score = 134 bits (148), Expect = 1e-26 Identities = 148/196 (76%), Gaps = 6/196 (3%) Strand=Plus/Minus Query 66391 CTCCTCAATGCCGTGATTTTTGCGC---AAGTCGAGGAACTCAAAGATGTCGGCATGCCA 66447 ||| || ||||||| || |||| | || ||||||||| |||||||| || ||||| Sbjct 3741 CTCTTCTTTGCCGTGGTT---GCGCTTGAGGTGGAGGAACTCGAAGATGTCCGCGTGCCA 3685 Query 66448 TGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCG 66507 || || |||||||||||||| || ||| | || ||||| || |||||||||||||| || Sbjct 3684 CGGCTCGAGGTAGATGGCGAAGGAACCCTTTCGCTTGCCTCCGCCTTGGTCGACGTAACG 3625 Query 66508 AGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCC 66567 || | |||||| || || | |||||||||||| ||||| |||| || ||||| || Sbjct 3624 CGCCGTGTCGTTGAACACGCGAAGCATCGGTACGAGGCCGTTGGATTGCCCGTTGGTTCC 3565 Query 66568 GTCGATGGGGGATCCT 66583 |||| |||||| Sbjct 3564 TCGGATGTACGATCCT 3549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397377029826320