Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_023503.1 Length=48800 Score E Sequences producing significant alignments: (Bits) Value seq24895 163 9e-36 >seq24895 Length=15594 Score = 163 bits (180), Expect = 9e-36 Identities = 279/402 (69%), Gaps = 2/402 (0%) Strand=Plus/Minus Query 2521 TACCCAATCATCACTATCGAAGATGGTATGGACGAAAACGACTGGGACGGTTGGAAATCT 2580 ||||| |||||| | |||||||| || ||||||| |||||||| || |||||| Sbjct 14328 TACCCGATCATCTCGATCGAAGACGGCCTGGACGAGTCCGACTGGGCTGGCTGGAAAGTG 14269 Query 2581 CTTACTGAACGTCTTGGTGGTAAAGTTCAATTGGTTGGTGACGACTTCTTCGTAACTAAC 2640 | || || | || | || | || |||| || |||||| | ||||| || ||| Sbjct 14268 TTGACCGACAAGATCGGCGAGAAGATCCAGCTGGTGGGCGACGACCTGTTCGTGACCAAC 14209 Query 2641 ACTGCTTACCTTGAAAAAGGTATTGCAGAACACGCT-GCTAACTCAATCCTTATCAAAGT 2699 || ||| || |||| || | | || | | | || ||||| ||||| ||||| | Sbjct 14208 ACCAAGATCCTGAAAGAAGGCATCG-ACAAAAAGATCGCCAACTCGATCCTGATCAAGTT 14150 Query 2700 TAACCAAATCGGTACTTTGACTGAAACTTTTGACGCTATCGAAATGGCGAAAGAAGCTGG 2759 ||||| ||||| || |||| ||||| | || || ||| | ||||| || | || || Sbjct 14149 CAACCAGATCGGCACCCTGACAGAAACCCTGGAAGCCATCCAGATGGCCAAGGCTGCGGG 14090 Query 2760 ATACACAGCAGTAGTATCACACCGTTCAGGTGAAACTGAAGATTCAACAATCGCTGATAT 2819 ||||| || || | || ||||| || || ||||| ||||| || || || || || | Sbjct 14089 CTACACCGCCGTGATCTCCCACCGCTCCGGCGAAACCGAAGACTCGACCATTGCCGACCT 14030 Query 2820 TGCAGTTGCAACTAACGCTGGTCAAATTAAGACAGGTTCATTGTCACGTACTGACCGTAT 2879 || || | ||| ||||| || || ||||| ||||| ||| ||| | || || | Sbjct 14029 GGCCGTGGGCACTTCGGCTGGGCAGATCAAGACCGGTTCCCTGTGCCGTTCCGATCGCGT 13970 Query 2880 TGCTAAATACAACCAATTGCTTCGTATCGAAGACCAACTTGG 2921 | | || |||||||||||||| ||||||||||| ||||| || Sbjct 13969 TTCCAAGTACAACCAATTGCTGCGTATCGAAGAGCAACTGGG 13928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 155965369445172