Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq6751 91.5 6e-13 seq31677 84.2 9e-11 >seq6751 Length=2615 Score = 91.5 bits (100), Expect = 6e-13 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 349103 CCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAAGGTCTGGAGGGTCAACTGC 349162 ||||||||||||||||| | || |||||||| || |||||||| | |||||||| || Sbjct 1899 CCCAGGGTCACGTTCTTCGAAGCCACGCCGGCGAAATGGAAGGTGTTGAGGGTCATTTGA 1958 Query 349163 GTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTACCATCTCGCCGGGCG 349217 || |||||||| || | ||| | |||| | || |||||||||||||||| Sbjct 1959 GTCGCCGGCTCGCCCATACTCTGCGCAGCGATGCACCCGACCATCTCGCCGGGCG 2013 >seq31677 Length=5372 Score = 84.2 bits (92), Expect = 9e-11 Identities = 110/150 (73%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 449005 GGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCGGGCGTCTCGCCG-GCCG 449063 |||||| || || ||| | | || ||||||||||| | || || | |||| | || Sbjct 2804 GGTCATCCGGGAGGGGAACCCGTGGGGGTTCATGATCAGATCTGGGCACATGCCGAGGCG 2863 Query 449064 CGTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGC 449123 |||||| |||| ||| | ||| ||| | ||||||| |||||||||||| ||||||| Sbjct 2864 -GTTGAACGGCAGGTCGGCTTGGTGGACGATCAGGCCGCAGACGCCCTTCTGCCCGTGGC 2922 Query 449124 GGCTGCAGAACTTGTCCCCCTGCTCGGGCT 449153 | | |||||||||| || |||||||| Sbjct 2923 GCGAGGAGAACTTGTCGCCGAACTCGGGCT 2952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2083660773532574