Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_031120.1 Length=241147 Score E Sequences producing significant alignments: (Bits) Value seq16927 89.7 8e-13 >seq16927 Length=19327 Score = 89.7 bits (98), Expect = 8e-13 Identities = 172/254 (68%), Gaps = 0/254 (0%) Strand=Plus/Minus Query 196808 GATATGTTCCTCGGTGTACCGTTCAACATCGCGTCTTACGCATTGCTGATTCACATGGTG 196867 ||| | |||||||| | |||| ||||| |||| | || ||||| | || ||| || Sbjct 16147 GATGTATTCCTCGGCCTGCCGTACAACACCGCGGCCCTGGCGTTGCTCACCCATATGCTG 16088 Query 196868 GCGCAACAGGTTAACATGGTACCGGGCGAGTTCGTTTGGACTGGCGGTGACGTCCACATC 196927 || || ||| || || | || |||| || | || || ||| |||| | Sbjct 16087 GCCCAGCAGTGCGACCTGATCCCTCACGAGATCATCGTCACCACGGGCGACACCCACGCC 16028 Query 196928 TACTCCAATCACATGGAACAGGTAGAAGAACAGCTGTCTCGTAAACCGAAAGCGTTGCCG 196987 ||| ||| |||||||||||| | | |||||| | || | ||||| | ||||| Sbjct 16027 TACAGCAACCACATGGAACAGATCCAGACCCAGCTGGCGCGCACGCCGAAGAAGCTGCCG 15968 Query 196988 ACGCTGGTTATCAAACGCAAACCGGACAGTATCTTCGATTACAAATTCGAAGACTTCGAA 197047 ||||| ||||| |||||||| | |||| |||||||||||||||||| || ||| Sbjct 15967 GAACTGGTGATCAAGCGCAAACCCGCGTCGATCTACGATTACAAATTCGAAGATTTTGAA 15908 Query 197048 CTGGTAGGCTACGA 197061 | || ||||| || Sbjct 15907 ATCGTGGGCTATGA 15894 Score = 89.7 bits (98), Expect = 8e-13 Identities = 126/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 196184 GACGGATTCCCGCTGGTCACCACGAAGAAACTCCATCTGCGTTCCATCATTCATGAACTG 196243 ||||| ||||||||| | ||||| ||||| || || | |||| | ||| || Sbjct 16573 GACGGCTTCCCGCTGCTGACCACCAAGAAGCTTCACTTCAAAAGCATCGCCAACGAATTG 16514 Query 196244 CTGTGGTTCCTCAACGGGGACACCAACATCAAGTACCTGAATGACAACGGTGTCTCTATC 196303 | ||| | | | || ||||||||||||||| ||||| || || || || |||| Sbjct 16513 ATCTGGATGTTGAGTGGCAACACCAACATCAAGTGGCTGAACGAAAATGGCGTGCGTATC 16454 Query 196304 TGGAACGAGTGGGCGAACGAACTCGGTAACCTGGGGCCGGTTTACGGTAAGCAGTGG 196360 ||| |||| ||||| | |||| ||| ||||||| ||||| ||||| |||||||| Sbjct 16453 TGGGACGAATGGGCCACCGAAGACGGCGACCTGGGCCCGGTGTACGGCGAGCAGTGG 16397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 771162289992360