Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diplonema_20papillatum_20[genbank_20GCA_5F001655075.1_202016-06-02] 39,413 sequences; 107,915,492 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq17960 118 1e-21 >seq17960 Length=1098 Score = 118 bits (130), Expect = 1e-21 Identities = 267/396 (67%), Gaps = 4/396 (1%) Strand=Plus/Plus Query 162455 TCTACCAAGCGAGCACCAGTGAGCTTTATGGGCTAGTTCAGGAGACACCCCAGAAAGAAA 162514 ||||||||||| || ||||| || ||| ||| ||| || |||| |||| Sbjct 378 TCTACCAAGCGTCGACGTCGGAGCTGTACGGGAAGGTTGTCGAGGTGCCGCAGACGGAAA 437 Query 162515 CCACTCCAATGTATCCACGATCCCCTTATGGAGTTGCTAAACTATATGGGTTCTGGATCA 162574 | || || | || || || || || || | || | || || || |||| |||||||| Sbjct 438 CGACGCCGTTTTACCCGCGCTCGCCGTACGCGGTCTCGAAGCTGTACGGGTACTGGATCA 497 Query 162575 TCAAAAACTACAGGGAAAGCTATGACATACATGCCTCTAGCGGTATTCTATTCAATCACG 162634 ||||||||||| ||||| ||||| || | | ||| || || ||||| |||| Sbjct 498 CGGTGAACTACAGGGAGAGCTACGACATGTTCGCAACGAACGGGATCCTGTTCAACCACG 557 Query 162635 AAAGCTCACGCAGAGGAGAGACGTTCGTCACACGCAAGATCGTCCGAGCCTTGTCCCGAA 162694 | ||| | || || |||| ||||||||| || | ||||| || |||||| || || | Sbjct 558 AGAGCCCGCGGAGGGGAGCGACGTTCGTGACGCAGAAGATTGTGCGAGCCGCGTGCCACA 617 Query 162695 TTAGTGTGGGACTCCAAAGTGATCTACAACTTGGAAACCTCAATGCCCGACGTGACTGGG 162754 | | ||| || | || || | || || ||| || | || || ||||||| Sbjct 618 TCAAGATGGACAAGCAGAAAGAGCTGCTGCTGGGGAACATCGACGCGAAGCGCGACTGGG 677 Query 162755 GACACGCCAAAGACTACGT-AGAGGCTATGTGGTTGATGCTTCAGCA-AGAGAAGCCAGA 162812 | ||||| || |||||||| | ||| |||||| |||| || ||||| || |||| Sbjct 678 GGCACGCGAAGGACTACGTGCGCGGC-ATGTGGATGATCCTGCAGCACCCAGTCGCCA-T 735 Query 162813 TGATTATGTGATCGCAACTGGTGAGCAGTATTCTGT 162848 || | |||| ||||||| || |||||| | || || Sbjct 736 GGACTTTGTGCTCGCAACCGGCGAGCAGCACTCCGT 771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691118543981880