Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endotrypanum_20monterogeii_20[genbank_20GCA_5F000333855.2_202016-09- 30] 1,959 sequences; 32,520,418 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq16 370 3e-100 >seq16 Length=800739 Score = 370 bits (410), Expect = 3e-100 Identities = 301/363 (83%), Gaps = 4/363 (1%) Strand=Plus/Minus Query 178 CTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGC 237 ||||||| ||||| || |||| | | || ||||||||||| |||||| || Sbjct 734560 CTTCATTCGATAAGTGAAGCAACGTTCCGAGTGGTGGTATTTCATTTGCGCTTGC---GC 734504 Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 | |||| ||| ||||||||| | ||| |||| || | |||| ||||||| |||||| Sbjct 734503 TTCCACCTATACTACACCTCAGATGTCGCCGCACAGAGCCAGACTGGAGTCAAACTCAAC 734444 Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 ||||||||||||||||||| | || |||| ||||||||||| |||| ||||||||||| Sbjct 734443 AGGGTCTTCTTTCCCCGCTTAGCCCTTCAAGTCCGTTCCCTTGACTGTCGTTTCGCTAGA 734384 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 ||||| | ||||||| ||||||||| |||||||||||||||||||| |||||| || || Sbjct 734383 TAGTAACTCGGGACAGAGGGAATCTCATTAATCCATTCATGCGCGTCTCTAATTGGAAGA 734324 Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct 734323 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCGTCGG 734264 Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCG-TCAACATCA 536 ||||| || |||| ||||||||||||||||||||||||||||| ||||| | ||| || Sbjct 734263 TGAATCTCGTCACGTTGACATTCAGAGCACTGGGCAGAAATCAGTTTGCGATATACACCA 734204 Query 537 CTT 539 ||| Sbjct 734203 CTT 734201 Score = 114 bits (126), Expect = 4e-23 Identities = 91/108 (84%), Gaps = 1/108 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| || ||||| ||||||||||||| | |||| | |||||||||||||||||| | Sbjct 734913 CTTGTGTTCTACGTGAGATTTCTGTTCCCACTGAGCTCGCCTTAGGACACCTGCGTTGTC 734854 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACA-ATGTC 113 || |||||||| ||||||||||||||||||||||| ||| || ||||| Sbjct 734853 GTGTAACAGATATGCCGCCCCAGCCAAACTCCCCATCTGGCAGATGTC 734806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635167966432