Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endotrypanum_20monterogeii_20[genbank_20GCA_5F000333855.2_202016-09- 30] 1,959 sequences; 32,520,418 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq15 244 8e-60 seq21 188 6e-43 seq20 167 2e-36 >seq15 Length=659801 Score = 244 bits (270), Expect = 8e-60 Identities = 600/887 (68%), Gaps = 27/887 (3%) Strand=Plus/Minus Query 61039 CAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATG 61098 || ||||| ||| || | ||| | ||||||||| |||| | ||||| ||||||| | Sbjct 502491 CAGGAGAACCCTTTCCGCTACGTCCTCTTCCCCATCAAGTACCATGATATATGGCGCAAG 502432 Query 61099 TACAAAAAGGCGGA-AGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACAT 61157 ||||| || ||| |||| | | |||||||||||||||| |||| ||| ||| ||||| Sbjct 502431 TACAAGGAGCAGGAGAGCTGCAT-CTGGACGGTGGAGGAGATCGACTTGGGCAACGACAT 502373 Query 61158 GAATGACTGGGAG-CGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGT 61216 ||| ||||||| | || | | || | | ||| || || ||||| ||||| ||| | || | Sbjct 502372 GAAGGACTGGGTGACGCTCAGCGCG-GATGAGCAGCACTTCATCAAACACGTGCTTGCAT 502314 Query 61217 TCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGG 61276 |||| |||| || || ||||||| |||||| | | | || ||| | | || | Sbjct 502313 TCTTCGCCGGCAGCGATGGCATCGTCATGGAGAATCTGGCGCAGCGGTTCATGAACGATG 502254 Query 61277 TGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACT 61336 || | || |||||||||| |||||||| |||||| | |||||||| |||||| Sbjct 502253 TGAAGGTACCGGAGGCGCGGGCCTTCTACGGGTTCCAGCTGATGATGGAGAACATCCACT 502194 Query 61337 CGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGG--AGCGGGCGGAACGTGAACG 61394 |||||| ||| ||| || | || ||||| |||| || |||| | ||| || || Sbjct 502193 CGGAGACGTATTCTGTGCTGCTGGACACGTATATCACGGACAGCGAGGAGAAGCTG--CG 502136 Query 61395 ATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAA 61454 | || | | || ||| |||| | || | || ||| || || ||||| | Sbjct 502135 ACTGCTGCACGCGATCCAGACCGTCCCATGCATCCAGAAGAAGGCAGACTGGGCGATGCG 502076 Query 61455 TTGGAT---CACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGT 61511 ||||| | | |||||| || || || ||| || | | ||||| | ||| Sbjct 502075 GTGGATTGGGAGCGGTACAA--GC----TTCCAGGAGCGACTGATCGGCTTTGCCGCGGT 502022 Query 61512 CGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACT 61571 ||||| |||| ||| || || || || | || ||| ||||||| || || || Sbjct 502021 GGAGGGCATATTCTTCTCCGGGTCCTTCTGTGCGCTGTTCTGGATGAAGAAGCGCGGCCT 501962 Query 61572 TATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGA 61631 ||||| || ||||| |||||||||||| | || || |||||||||||| |||| || Sbjct 501961 GATGCCGGGGCTGACGTTCAGCAATGAGCTCATCTCGCGCGACGAGGGCCTGCACACCGA 501902 Query 61632 TTTTGCTGTTTTGCTATTCAA-ACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGG 61690 |||||| | |||| | ||| ||| | | ||| | |||| ||||| || Sbjct 501901 TTTTGCCTGTCTGCTGTACAACTCGC-ACATCAAGAACAAGCTGTCGCGCGAGCGCGTAC 501843 Query 61691 GTGAGATTGTTCGT-GAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCC 61749 |||| | |||| || ||||| ||||| | || ||| | ||||| | || Sbjct 501842 TGGAGA-TCATCGTGGACGCGGTGGACATCGAGCGCGAGTTTATCTGCGACGCGCTTCCA 501784 Query 61750 GTCTCACTCATCGGCATGAATTGTGGA-CTAATGTCGCAGTATATTGAATTTGTTGCCGA 61808 || |||||| |||||||| | ||| || ||| | | || || || |||||||| || Sbjct 501783 GTAAGACTCATTGGCATGAA-CGCGGAGCTGATGGCACGTTACATCGAGTTTGTTGCGGA 501725 Query 61809 CCGTCTG-TTG-GTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGAT 61866 ||| ||| ||| ||| | |||| | | || | ||| || | | || ||||| Sbjct 501724 CCGACTGCTTGTGTC-ACTTGGCGA-GGAGAAGCACTACAACGTGTCGCAGCCCTTTGAC 501667 Query 61867 TTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAA 61913 |||||||| ||||| ||||| | |||||||||||||| || ||||| Sbjct 501666 TTCATGGAGATGATCTCGCTTCAGGGCAAGACGAATTTCTTTGAGAA 501620 >seq21 Length=1031504 Score = 188 bits (208), Expect = 6e-43 Identities = 339/490 (69%), Gaps = 8/490 (2%) Strand=Plus/Minus Query 66281 AGACATGGACACTTGTGTGGACACATCAGCGACCA-ATCACCATCCTGTTCTACACGACG 66339 |||| || || ||||| || ||| |||| ||| ||| || || ||| || || Sbjct 213504 AGACCCGGGCAGTTGTGGGGGTCCATGAGCGTCCACATCCCCTCGCTCTTC-ACCCGTGT 213446 Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399 ||| || ||||| || | ||| || |||||||||| ||||| || || || || || | Sbjct 213445 CATGAACAGATCTGGGACCCAAAGCCCGTAGAAGAGGTCGCGGGCACGCTGATCATCCTT 213386 Query 66400 GCC-GTGATTT--TTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAG 66456 ||| ||| | || |||| ||||| |||| |||||||| ||||| || || || Sbjct 213385 GCCCGTGTTGCGCTTCAGCAAC---AGGAAGCCAAAAATGTCGGCGTGCCACGGCTCAAG 213329 Query 66457 GTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATT 66516 |||||||||||| | |||| | || || |||||||| ||||| |||||||| ||| || Sbjct 213328 GTAGATGGCGAAGGCGCCCTTGCGCTTACCGCCACCCTGGTCCACGTAGCGCGCGGTGTT 213269 Query 66517 GTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGG 66576 ||||||||| ||||||||||| ||||||||||| || | || || |||||| | ||| Sbjct 213268 GTTGAAGACCCGCAACATCGGCACGAGCCCGTTCGACGTACCGTTCGTGCCGGCAATGTA 213209 Query 66577 GGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGAT 66636 | || || || || | ||| |||| ||| ||||| |||||||| | || ||| Sbjct 213208 GCTGCCCTCCGCGCGGATGTTGTGCACATGCAGGCCAATGCCACCGGCTGCTTTGCTGAT 213149 Query 66637 GGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAG 66696 ||||| || | || | | || || || ||| |||| | ||| | | Sbjct 213148 CAGGGCACACTCCTTGAGCGTGTCGTAAATACCCTCGATGCTGTCATCTTTGGATGCAAC 213089 Query 66697 GAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGC 66756 || ||||||| || | ||| || || || || |||| |||||| || || || || Sbjct 213088 CAGAAAGCATGAGCTCATTTGCGGCTTTGGCGTACCGGCATTGAAGAGAGTCGGAGTCGC 213029 Query 66757 GTGCGTAAAG 66766 ||| || ||| Sbjct 213028 GTGAGTGAAG 213019 >seq20 Length=978369 Score = 167 bits (184), Expect = 2e-36 Identities = 531/804 (66%), Gaps = 27/804 (3%) Strand=Plus/Minus Query 61121 TCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAG-CGTTTATCG 61179 ||||||||||||| ||||| || ||| ||| ||||||| ||||||| | | | | || Sbjct 867835 TCTGGACGGTGGATGAGGTTGACTTGGGCAACGACATGAGAGACTGGGCGAAGCTCAGCG 867776 Query 61180 AGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATC 61239 | | ||| || || |||||||| || ||| | || |||||||||| || || ||| Sbjct 867775 CG-GATGAGCAGCACTTCATTAAGCACGTGCTTGCATTCTTTGCCGGCAGCGATGGCATC 867717 Query 61240 GTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGT 61299 |||| |||||||| | | || ||| | || ||| | || |||||||||| | | Sbjct 867716 GTCATGGAGAATTTGGCGCAGCGGTTCATAAACGATGTGAAGGTACCGGAGGCGCGATTT 867657 Query 61300 TTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATC 61359 |||||||| | ||| | |||||||| ||||||| || ||||| | | || | Sbjct 867656 TTCTACGGGCTGCAGCTGATGATGGAGAACATCCACTCAGAAATGTATTCTCTGCTGCTG 867597 Query 61360 GATACGTACAT--CAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGA 61417 || ||||| || ||| |||| | ||| ||| ||| || | | || ||| |||| Sbjct 867596 GACACGTATATCACAGACAGCGCGGAGAAGGTG--CGACTGCTGCACGCGATCCAGACCG 867539 Query 61418 TACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGAT---CACCAGTACAACGG 61474 | || | || ||| || || ||||| | ||| | | | || ||| | Sbjct 867538 TTCCATGCATCCAGAAGAAGGCAGACTGGGCGATGCGGTGGGTTGGGAGCGGTGCAA--G 867481 Query 61475 CTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGAT 61534 | || || ||| || | | ||||| | ||| ||||| |||| ||| || | Sbjct 867480 C----TTCCAGGAGCGACTGATCGGCTTTGCCGCGGTGGAGGGCATATTCTTCTCCGGGT 867425 Query 61535 CGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCA 61594 | || || | || ||| ||| ||| ||||| || ||||| || ||||| ||||||| Sbjct 867424 CCTTCTGTGCGCTATTCTGGCTGAGGAAGCGTGGCCTGATGCCGGGGCTGACGTTCAGCA 867365 Query 61595 ATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAAC 61654 ||||| | || || |||||||||||| |||| ||||| || | |||| | ||| Sbjct 867364 ATGAGCTCATCTCGCGCGACGAGGGCCTGCACACCGATTTCGCCTGTCTGCTGTACAACT 867305 Query 61655 GCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAG-GCGGTA 61713 || | ||| | |||| ||||| ||| |||| | ||||||| ||||| Sbjct 867304 CGTACATCAAGAACAAGCTGTCGCGCGAGCGCGTGCTGGAGA-TCATCGTGAGCGCGGTG 867246 Query 61714 ACTATCGAACAGGAATT--TCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATT 61771 ||||| | || || |||| | |||| | || || |||||| |||||||| Sbjct 867245 GACATCGAGCGCGAGTTTATCTGCC--ACGCGCTTCCAGTAAGACTCATTGGCATGAA-C 867189 Query 61772 GTGGA-CTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTG-TTG-GTCGATTTGG 61828 | | | | ||| | |||| || || || ||||| ||||| ||| ||| ||| | |||| Sbjct 867188 GCGAAGTTGATGACAGAGTACATCGAGTTCGTTGCGGACCGACTGCTTGTGTC-ACTTGG 867130 Query 61829 GTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGG 61888 | |||| | ||| || | | || ||||| |||||||| ||||| ||||| Sbjct 867129 CGA-GAAGAAGCACTACAACGTGTCGCAGCCCTTTGACTTCATGGAGATGATCTCGCTTC 867071 Query 61889 ATGGCAAGACGAATTTTTTCGAGA 61912 | |||||| | || || || |||| Sbjct 867070 AGGGCAAGGCCAACTTCTTTGAGA 867047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397558507939760