Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euglena_20gracilis_20var._20bacillaris_20[genbank_20GCA_5F001638955. 1_202016-05-06] 105,159 sequences; 41,195,790 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq49 116 7e-24 >seq49 Length=10043 Score = 116 bits (128), Expect = 7e-24 Identities = 169/235 (72%), Gaps = 18/235 (8%) Strand=Plus/Plus Query 111 GAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGA 170 ||| ||| | |||||||||||||| | |||||| ||||||||||||||| ||||| || Sbjct 2832 GAGCCAACAGCAGGTCTGTGATGCTCCCAGATGTCCTGGGCCGCACGCGCACTACATTGT 2891 Query 171 CAGAGCCAACGAGTT--CAT---CAC----------CTTGGCCGGAAG-GTCTGGGTAAT 214 || || || | || ||| ||| | ||||| |||| | ||||| ||| Sbjct 2892 CACAGTGAAGGTGTCGACATGCCCACTCCGGTGGGCCCTGGCCTGAAGAGGCTGGGAAAT 2951 Query 215 CTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTAT-TGCTCTTCAACGAGGA 273 | || | || || ||| ||||||||||| |||||| | | ||| ||| |||| ||| Sbjct 2952 CCTGCAAGCCTGTGACGTACTGGGGATAGATGGTTGCAACTGTCTGC-CTTGAACGTGGA 3010 Query 274 ATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||||||||| || | ||||||||| | |||| ||||||||| |||||| Sbjct 3011 ATGCCTAGTATGCCTGGGTCATCAGCCCAGACCGATTGTGTCCCTGCCATTTGTA 3065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946203933952