Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euglena_20gracilis_20var._20bacillaris_20[genbank_20GCA_5F001638955. 1_202016-05-06] 105,159 sequences; 41,195,790 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq49 129 2e-27 >seq49 Length=10043 Score = 129 bits (142), Expect = 2e-27 Identities = 116/145 (80%), Gaps = 2/145 (1%) Strand=Plus/Minus Query 73 ATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCC 132 || ||| |||||||| |||||||||| |||||| ||||||||||| |||||||||||| Sbjct 1475 ATGGGGCAATTTGCGTGCCTGCTGCCCACCTTGGTAGTGGTAGCCGTCTCTCAGGCTCCC 1416 Query 133 TCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCT 192 |||||||||||||||||| |||| ||||||||||| | ||| || | || || | Sbjct 1415 TCTCCGGAATCGAACCCTGATTCTCCGTTACCCGTCAAGGCCACTGTGGTCCGATACACC 1356 Query 193 ACCATCGAAAGTTGATAGGGCAGAA 217 || || ||| ||||||| ||||| Sbjct 1355 ACAGTC--AAGCTGATAGGTCAGAA 1333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1508811678464