Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herpetomonas_20muscarum_20[genbank_20GCA_5F000482205.1_202013-10-25] 10,264 sequences; 30,844,810 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq6512 89.7 2e-12 >seq6512 Length=2066 Score = 89.7 bits (98), Expect = 2e-12 Identities = 112/145 (77%), Gaps = 8/145 (6%) Strand=Plus/Plus Query 364430 GTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGTCAGCG 364489 |||||||| |||||||| | | ||||||||||||||| ||| ||||| || ||||| ||| Sbjct 982 GTCATACGGGAGGGAATAGCGTGAGGGTTGATGATGAGGTCGGGCACAATACCGTC-GCG 1040 Query 364490 G-TAAAGGGCATAT-CTTCGGGAGGAAC-GATGAGACCAATGGTTCCCTTTTGCGCATAG 364546 | | |||||||| | || | || ||||| || | ||| |||| ||||| || | | Sbjct 1041 GTTGAAGGGCATGTCCTCCTGGCGGAACTGA--ATACCGTTGGTACCCTTCTGACCGTGA 1098 Query 364547 CGAGAAGCA-AACTTGTCGCCAATG 364570 ||| ||| ||||||||||||||| Sbjct 1099 CGA-CTGCAGAACTTGTCGCCAATG 1122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884638523301752