Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20amazonensis_20[genbank_20GCA_5F000438535.1_202013-07- 18] 2,627 sequences; 29,029,348 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq2244 147 7e-33 >seq2244 Length=2833 Score = 147 bits (162), Expect = 7e-33 Identities = 119/143 (83%), Gaps = 1/143 (1%) Strand=Plus/Plus Query 73 ATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCC 132 |||||| ||||||||||||||||||| ||| | || |||||||| |||||||||||||| Sbjct 1939 ATTGGGCAATTTGCGCGCCTGCTGCCCTCCGTAGAAGTGGTAGCTATTTCTCAGGCTCCC 1998 Query 133 TCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCT 192 ||||||||||||||||||||| ||||| | ||||| | |||||| || |||||| | Sbjct 1999 TCTCCGGAATCGAACCCTAATCCCCCGCT-CCCGTCAACGCCATGGCAGTCCACTACACG 2057 Query 193 ACCATCGAAAGTTGATAGGGCAG 215 ||||| || ||||||||||| Sbjct 2058 GCCATCACCAGCTGATAGGGCAG 2080 Score = 84.2 bits (92), Expect = 7e-14 Identities = 79/98 (81%), Gaps = 6/98 (6%) Strand=Plus/Plus Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGC--TTATACTTAGACATGCA 466 ||||| ||||||||||| ||||| ||| ||| | | ||| | || || || |||||| Sbjct 2322 CTGATGTAATGAGCCATGCGCAGATTC-CTGCAAA---TGCAGTGATTCTGAGGCATGCA 2377 Query 467 TGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||| | || |||| |||||||||||||||||||||| Sbjct 2378 TGGCTAAGTCCTTGAAACAAGCATATGACTACTGGCAG 2415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510360321792