Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20amazonensis_20[genbank_20GCA_5F000438535.1_202013-07- 18] 2,627 sequences; 29,029,348 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq122 104 1e-16 seq1556 95.1 5e-14 >seq122 Length=9388 Score = 104 bits (114), Expect = 1e-16 Identities = 124/166 (75%), Gaps = 2/166 (1%) Strand=Plus/Minus Query 448987 CTCGAGCAACATGGCGTAGGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTC 449046 |||||||| | || || |||||||| ||| || | |||||||||||||| || || Sbjct 8051 CTCGAGCAGCTTGCCGACCGTCATGCGGCTGGGGAAGCCGTGCGGGTTCATGATCATATC 7992 Query 449047 GGGCGTCTCGCCGGCCGCGTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGAC 449106 ||| | |||| | ||||||| |||||||| | ||| || | ||||||| ||| Sbjct 7991 GGGGCACATGCCGCGCTCGTTGAAAGGCATGTCAACTCCGTTCACAATCAGGCCGACGAC 7932 Query 449107 GCCCTTCTGGCCGTGGCG-GCTGCAGAACTTGTCCCCCTGCTCGGG 449151 ||||||||||||||| || | || |||||||||| || |||| || Sbjct 7931 GCCCTTCTGGCCGTGACGTGATG-AGAACTTGTCACCGGGCTCTGG 7887 >seq1556 Length=11391 Score = 95.1 bits (104), Expect = 5e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 449006 GTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCGGGCGTCTCGCCGGCCGCG 449065 |||||||| || || ||| || ||||| ||||||| ||| ||| |||| | | Sbjct 6785 GTCATGCGGGAGGGAATGGCGTGGGGGTTGATGATGAGGTCCGGCACGATGCCGTCGCGG 6726 Query 449066 TTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGCGG 449125 ||||||||||||||||| || | | | ||||||| |||||| || ||||||||| Sbjct 6725 TTGAAGGGCATGTCCTCCTGGCGAAACTGGATGCCGTTGGTGCCCTTTTGTCCGTGGCGG 6666 Query 449126 CTGCAGAACTTGTCCCC 449142 |||||||||||||| || Sbjct 6665 CTGCAGAACTTGTCGCC 6649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084667319495346