Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20amazonensis_20[genbank_20GCA_5F000438535.1_202013-07- 18] 2,627 sequences; 29,029,348 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq1556 89.7 2e-12 >seq1556 Length=11391 Score = 89.7 bits (98), Expect = 2e-12 Identities = 116/152 (76%), Gaps = 10/152 (7%) Strand=Plus/Minus Query 364430 GTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGTCAGCG 364489 ||||| || |||||||||| | | ||||||||||||| ||| ||||| |||||||| ||| Sbjct 6785 GTCATGCGGGAGGGAATGGCGTGGGGGTTGATGATGAGGTCCGGCACGATGCCGTC-GCG 6727 Query 364490 G-TAAAGGGCATAT-CTTCGGGAGGAAC--GATGAGACCAATGGTTCCCTTTTGCGCATA 364545 | | |||||||| | || | || | ||| |||| || |||| |||||||| | | Sbjct 6726 GTTGAAGGGCATGTCCTCCTGGCGAAACTGGATG---CCGTTGGTGCCCTTTTGTCCGTG 6670 Query 364546 GCGAGAAGCA-AACTTGTCGCCAATGACTGGG 364576 ||| | ||| ||||||||||| ||| |||| Sbjct 6669 GCG-GCTGCAGAACTTGTCGCCGATGTTTGGG 6639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884822957668911