Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20arabica_20[genbank_20GCA_5F000410695.2_202016-09-16] 168 sequences; 31,269,090 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq21 235 4e-57 seq15 205 7e-48 >seq21 Length=1141120 Score = 235 bits (260), Expect = 4e-57 Identities = 512/758 (68%), Gaps = 10/758 (1%) Strand=Plus/Minus Query 66014 GATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCAC 66073 || ||||||||||| || || |||| | || | || ||||||||||| || ||||| Sbjct 324288 GAGGCGAGGTTGCACACCGCCGTCTCCTGCGGCGACGTGTACTCGACAATCTCCGTGCAT 324229 Query 66074 AGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCC 66133 || || ||| || ||||| | ||||| || || ||||| |||||||| ||| Sbjct 324228 AGGTTCGAGCACTTGATTGTGCCAAGATTCTTCTGGTTCGACTTGCTGTTGCATGCGTCC 324169 Query 66134 TTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGA 66193 ||||| | ||| |||| ||| ||||| | || ||||| | |||||| ||| | Sbjct 324168 TTGTAGAGGATGAACGGCCCGCCCGTCTCGATCTGCGACTCCAGGATGGCAAACCACACT 324109 Query 66194 GCGCGTGCCTTCACCGTACGTACCGCC-CTACCTTTGCGTTCGTAATGTTCGTAGAGGTG 66252 | | |||| | ||| | | |||| | || | | ||||| | |||||||| || Sbjct 324108 TCCTGGGCCTGGATCGT-CTTGACGCCGCGGCCCTCGGACTCGTAGCGCTCGTAGAGCTG 324050 Query 66253 TTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGA 66312 || || ||||| | ||| || | || ||| ||| ||| |||||||| Sbjct 324049 CTCAAACTCCTCACCATAGCAATCGCTGAGGCCCGGGCACGTGTTGGGATCCATCAGCGT 323990 Query 66313 CCAATCACCATC-CTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGA 66371 ||| | || || || ||| ||||| | |||||| ||||| || ||||| || || |||| Sbjct 323989 CCACTTCCCCTCGCTTTTC-ACACGCCTCATAAACAGATCTGGGATCCACAGCGCATAGA 323931 Query 66372 AGAGATCGCGTGCTCGTTGCTCCTCAATGCC-GTGATT--TTTGCGCAAGTCGAGGAACT 66428 |||| ||||| || || || || || | || ||| | ||| ||| || || Sbjct 323930 AGAGGTCGCGGGCGCGCTGGTCATCTTTTCCCGTGTTGCGTTTCAGCAGC---AGAAAGC 323874 Query 66429 CAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGC 66488 |||||| |||||| ||||| || || || |||| ||| || | |||| | || || |||| Sbjct 323873 CAAAGACGTCGGCGTGCCAGGGCTCGAGATAGACGGCAAAGGCGCCCTTGCGCTTACCGC 323814 Query 66489 CACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGT 66548 |||| ||||| |||||||| ||| ||||||||||| || | ||| || |||||||||| Sbjct 323813 CACCCTGGTCCACGTAGCGGGCGGTGTTGTTGAAGACGCGTAGCATTGGCACGAGCCCGT 323754 Query 66549 TAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCA 66608 | || |||| || || || | ||| | || || || || | ||| || | || Sbjct 323753 TCGACGTGCCGTTCGTACCAGCTATGTAGCTGCCCGCCGCGCGGATGTTGTGCACGTGCA 323694 Query 66609 GACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGC 66668 | ||||| || ||||||| || ||| | || || || || || | | |||| Sbjct 323693 GGCCAATGCCGCCGGCCGCTTTGCTGATCACCGCGCACTCCTTCAGCGTGTCGTAGATGC 323634 Query 66669 CGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTG 66728 |||| ||| ||| |||| | || ||| |||| || || | ||| || || || | Sbjct 323633 CGTCGATGCTGTCTTCCTTCGACGCCACCAGGAAGCACGAGCTCATTTGCGGCTTCGGGG 323574 Query 66729 TGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAG 66766 || |||| |||||||| || || ||||| || ||| Sbjct 323573 TGCCGGCGTTAAAGAGGGTCGGGGTGGCGTGGGTGAAG 323536 Score = 96.9 bits (106), Expect = 3e-15 Identities = 97/126 (77%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 65433 GGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATT 65492 ||||||||||| ||| ||||| ||||| |||||||| || || | ||| || ||| | | Sbjct 324857 GGAACTCGCCGCTCAGCACACGGCGGACGTAGATGTTCGAGGTAAAGGGCTCGAAGCACT 324798 Query 65493 CAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGT 65552 | ||||||| ||||| || | || || || ||||||||||| || |||| || |||| Sbjct 324797 CGTTGTTGCCGAGAATCTGCGAGGTGGACGCGGTTGGCATGGGGGCAACCAGCAGGGAGT 324738 Query 65553 TTCGCA 65558 | |||| Sbjct 324737 TGCGCA 324732 >seq15 Length=568429 Score = 205 bits (226), Expect = 7e-48 Identities = 591/886 (67%), Gaps = 25/886 (3%) Strand=Plus/Minus Query 61038 GCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCAT 61097 ||| ||||| || || | ||| | ||||| ||| |||| | || || ||||||| Sbjct 411028 GCAGGAGAACCCGTTCCGCTACGTCCTTTTCCCAATCCAGTACCATGACATCTGGCGCAA 410969 Query 61098 GTACAAAAAGGCGGA-AGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACA 61156 |||||| || ||| |||| | | ||||||||||||||| |||| || ||| |||| Sbjct 410968 GTACAAGGAGCAGGAGAGCTGCAT-CTGGACGGTGGAGGAAATCGACCTGGGCAACGACA 410910 Query 61157 TGAATGACTGGG-AGCGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCG 61215 |||| ||||||| | || | | ||| ||| || | || ||||| || |||||| | || Sbjct 410909 TGAAGGACTGGGCAACGCTGAACGA-CGGGGAGCGGCACTTCATCAAGCATGTGCTTGCC 410851 Query 61216 TTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAG 61275 || || |||| ||||| || |||| |||||| | | | || ||| | || Sbjct 410850 TTTTTCGCCGGCAGCGACGGCATAGTCATCGAGAATCTTGCGCAGCGCTTCATGAGCGAC 410791 Query 61276 GTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCAC 61335 ||| | ||| | |||||||| |||||||| ||||| | |||||||| ||||| Sbjct 410790 GTGAAGGTGCCAGAGGCGCGCGCGTTCTACGGGTTCCAACTGATGATGGAGAACATCCAC 410731 Query 61336 TCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGA--ACGTGAAC 61393 ||||||| |||| ||| || | || |||||||||| ||| ||| ||| | || | Sbjct 410730 TCGGAGACGTACTCTGTGCTGCTGGACACGTACATCACGGACAGGGAGGAGAAGCTG--C 410673 Query 61394 GATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCA 61453 | || | | || || ||||||| ||| | || ||| ||||| |||||| | Sbjct 410672 GGCTGCTGCACGCGATACAGACGATCCCGTGCATCCAGAAGAAGGCGGAGTGGGCCGTGC 410613 Query 61454 ATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCG 61513 |||||| || || || | | ||| || || || | | ||||| | ||| | Sbjct 410612 GGTGGATCGGGAG--CAGCG-CGAGCTTTCAGGAGCGGCTGATCGGCTTTGCCGCGGTGG 410556 Query 61514 AGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTA 61573 |||| | || || || ||||| ||| | || ||| ||||||| || || || | Sbjct 410555 AGGGCATTTTCTTTTCCGGGTCGTTCTGCGCGCTGTTCTGGCTGAAGAAGCGCGGTCTGA 410496 Query 61574 TGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATT 61633 |||| || ||||| |||||||| ||| | || || ||||||||||| | || || | Sbjct 410495 TGCCAGGGCTGACGTTCAGCAACGAGCTCATCTCGCGCGACGAGGGTCTACACACGGACT 410436 Query 61634 TTGCTGTTTTGCTATTCAA-ACGC-TATC-TGGTGAATCGTCCGTCGGAGGAGCGTGTGG 61690 | || |||| | ||| ||| ||| | || | ||| || ||||| ||| Sbjct 410435 TCGCATGCCTGCTGTACAACTCGCACATCAAGCACAAGCTGCCG-CG--CGAGCGCGTGC 410379 Query 61691 GTGAGATTGTTCGT-GAGGCGGTAACTATCGAACAGGAATT--TCTGACTGACGCTTTGC 61747 |||||| |||| || ||||| | ||||| | || || |||| ||||| ||| Sbjct 410378 TGGAGATT-ATCGTGGATGCGGTGAACATCGAGCGCGAGTTCATCTG--CGACGCGCTGC 410322 Query 61748 CCGTCTCACTCATCGGCATGAATTGTGGA-CTAATGTCGCAGTATATTGAATTTGTTGCC 61806 | || || || |||||||| | ||| || ||| ||||||| || || || || || Sbjct 410321 CGGTGCGGCTGATTGGCATGAA-CGCGGAGCTGATGGCGCAGTACATCGAGTTCGTCGCG 410263 Query 61807 GACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGAT 61866 ||||| ||| |||| | || | || | ||| | ||| | || || || Sbjct 410262 GACCGGCTGCTGGTGTCGCTCGGCGAGGAGAAGCACTACCACTCGACGCAGCCGTTCGAA 410203 Query 61867 TTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGA 61912 |||||||| ||||| |||||| | ||||| || || || ||||||| Sbjct 410202 TTCATGGAGATGATCTCGCTGCAGGGCAAAACAAACTTCTTCGAGA 410157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567185979520