Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20arabica_20[genbank_20GCA_5F000410695.2_202016-09-16] 168 sequences; 31,269,090 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq33 95.1 5e-14 seq13 95.1 5e-14 >seq33 Length=500272 Score = 95.1 bits (104), Expect = 5e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 449006 GTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCGGGCGTCTCGCCGGCCGCG 449065 |||||||| || || ||| || ||||| ||||||| ||| ||| |||| | | Sbjct 298893 GTCATGCGGGAGGGAATGGCGTGGGGGTTGATGATGAGGTCCGGCACGATGCCGTCGCGG 298834 Query 449066 TTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGCGG 449125 ||||||||||||||||| || | | | ||||||| |||||| || ||||||||| Sbjct 298833 TTGAAGGGCATGTCCTCCTGGCGAAACTGGATGCCGTTGGTGCCCTTTTGTCCGTGGCGG 298774 Query 449126 CTGCAGAACTTGTCCCC 449142 |||||||||||||| || Sbjct 298773 CTGCAGAACTTGTCGCC 298757 >seq13 Length=722582 Score = 95.1 bits (104), Expect = 5e-14 Identities = 122/166 (73%), Gaps = 2/166 (1%) Strand=Plus/Plus Query 448987 CTCGAGCAACATGGCGTAGGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTC 449046 |||||||||| || || |||||||| ||| || | |||||||||||||| || || Sbjct 1401 CTCGAGCAACTTGCCGACCGTCATGCGACTGGGGAAGCCGTGCGGGTTCATGATCATATC 1460 Query 449047 GGGCGTCTCGCCGGCCGCGTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGAC 449106 ||| | |||| | ||||||||||||| || | || || | |||||| ||| Sbjct 1461 GGGGCACATGCCGCGCTCGTTGAAGGGCATATCGACCCCATTCACAATCAGGCCCACGAC 1520 Query 449107 GCCCTTCTGGCCGTGGCG-GCTGCAGAACTTGTCCCCCTGCTCGGG 449151 ||||||||| ||||| || | || |||||||||| ||| | || || Sbjct 1521 GCCCTTCTGTCCGTGACGTGATG-AGAACTTGTCACCCGGTTCTGG 1565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084734603150064