Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20donovani_20[genbank_20GCA_5F000227135.2_202011-12-13] 36 sequences; 32,444,968 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq27 147 7e-33 >seq27 Length=1024085 Score = 147 bits (162), Expect = 7e-33 Identities = 119/143 (83%), Gaps = 1/143 (1%) Strand=Plus/Plus Query 73 ATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCC 132 |||||| ||||||||||||||||||| ||| | || |||||||| |||||||||||||| Sbjct 1021661 ATTGGGCAATTTGCGCGCCTGCTGCCCTCCGTAGAAGTGGTAGCTATTTCTCAGGCTCCC 1021720 Query 133 TCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCT 192 ||||||||||||||||||||| ||||| | ||||| | |||||| || |||||| | Sbjct 1021721 TCTCCGGAATCGAACCCTAATCCCCCGCT-CCCGTCAACGCCATGGCAGTCCACTACACG 1021779 Query 193 ACCATCGAAAGTTGATAGGGCAG 215 ||||| || ||||||||||| Sbjct 1021780 GCCATCACCAGCTGATAGGGCAG 1021802 Score = 84.2 bits (92), Expect = 7e-14 Identities = 79/98 (81%), Gaps = 6/98 (6%) Strand=Plus/Plus Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGC--TTATACTTAGACATGCA 466 ||||| ||||||||||| ||||| ||| ||| | | ||| | || || || |||||| Sbjct 1022044 CTGATGTAATGAGCCATGCGCAGATTC-CTGCAAA---TGCAGTGATTCTGAGGCATGCA 1022099 Query 467 TGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||| | || |||| |||||||||||||||||||||| Sbjct 1022100 TGGCTAAGTCCTTGAAACAAGCATATGACTACTGGCAG 1022137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510399456256