Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20donovani_20[genbank_20GCA_5F001989955.1_202017-02-07] 36 sequences; 32,148,377 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq20 91.5 6e-13 seq31 86.0 3e-11 >seq20 Length=750899 Score = 91.5 bits (100), Expect = 6e-13 Identities = 116/157 (74%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 448987 CTCGAGCAACATGGCGTAGGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTC 449046 |||||||||| || || |||||||| ||| || | || ||||||||||| || || Sbjct 1329 CTCGAGCAACTTGCCGACCGTCATGCGACTGGGGAAGCCGTGGGGGTTCATGATCATATC 1388 Query 449047 GGGCGTCTCGCCGGCCGCGTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGAC 449106 ||| | ||| | ||||||||||||| || | ||| || | ||||||| ||| Sbjct 1389 GGGGCACATGCCTCGCTCGTTGAAGGGCATATCGACTCCGTTCACAATCAGGCCGACGAC 1448 Query 449107 GCCCTTCTGGCCGTGGCG-GCTGCAGAACTTGTCCCC 449142 ||||||||| ||||| || | || |||||||||| || Sbjct 1449 GCCCTTCTGTCCGTGACGTGATG-AGAACTTGTCACC 1484 >seq31 Length=1489210 Score = 86.0 bits (94), Expect = 3e-11 Identities = 108/147 (73%), Gaps = 1/147 (1%) Strand=Plus/Plus Query 449006 GTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCGGGCGTCTCGCCGGCCGCG 449065 |||||||| || || ||| || ||||| ||||||| ||| ||| |||| | | Sbjct 38115 GTCATGCGGGAGGGAATGGCGTGGGGGTTGATGATGAGGTCCGGCACGATGCCGTCGCGG 38174 Query 449066 TTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGCGG 449125 ||||||||||||||||| || | | | ||||||| ||| || || || |||||| Sbjct 38175 TTGAAGGGCATGTCCTCCTGGCGAAACTGGATGCCGTTGGTGCCTTTTTGTCCATGGCGG 38234 Query 449126 CTGCAGAACTTGTC-CCCCTGCTCGGG 449151 |||||||||||||| || || ||||| Sbjct 38235 CTGCAGAACTTGTCGCCGATGTTCGGG 38261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084738214960728