Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20enriettii_20[genbank_20GCA_5F000410755.2_202016-09-30] 495 sequences; 30,761,861 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq21 280 1e-70 seq15 188 6e-43 >seq21 Length=1153175 Score = 280 bits (310), Expect = 1e-70 Identities = 893/1358 (66%), Gaps = 54/1358 (4%) Strand=Plus/Minus Query 65433 GGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATT 65492 ||||||||||| ||| ||||| || ||||| ||||| || |||| || || ||| | | Sbjct 326270 GGAACTCGCCGCTCAGCACACGCCGAACATAAATGTTTGAGGTGAAAGGCTCGAAGCACT 326211 Query 65493 CAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGT 65552 | ||||||| ||||| || | || || || ||||||||||| || |||| ||||||| Sbjct 326210 CGTTGTTGCCGAGAATCTGCGAGGTGGACGCGGTTGGCATGGGCGCAACCAGTAATGAGT 326151 Query 65553 TTCGCAATCCGT------TCA---TTTCAATGTTG-TGACGCAATTCGTCCCAGTTCCAC 65602 | |||| ||| ||| | || || | || | || ||||||| | || Sbjct 326150 TGCGCATGCCGACCTGCCTCACCTTCTCCTTGAGGCTGGCCCA----GTCCCAG--CGAC 326097 Query 65603 ATCGGTTTATCGTCGA-CATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGC 65661 | ||| |||| | | | |||||| || || || | || ||||| Sbjct 326096 CACTGTTCG--GTCGCGCGTTCTT---CCACATGTCAAACTGGAGAATGCCCTCGCTGGC 326042 Query 65662 CGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTG-GTCT 65720 ||| ||| ||| | |||||| ||||||||| | || || | || | | || Sbjct 326041 CGGGCTGCCGTTGAAGGTCTCGTACGGGCCCTCCTCCCTCGCCAGCTC-CATCGACGACT 325983 Query 65721 CGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGT-CGATTAAGTTCACGTGCCTCATCG 65779 ||| || || || || ||||||||||| || | || |||| | | ||||| || Sbjct 325982 CGACCGCCGCGAAGTAGATGGTCTCGAAGATCTCTGCGTTTAACCGCT-GCGCCTC--CG 325926 Query 65780 CTCT--CGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATAC 65837 || | |||||| | ||| |||| |||||||| || ||||| || || |||| | Sbjct 325925 CTGAGACAAACGGCAGCCGCATGAGGATGAAAGTGTCCGCAAGACCCTGCACACCAAGGC 325866 Query 65838 CGATGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATAT 65897 ||| ||| || | |||| ||| || | |||| ||||||||||| ||| | Sbjct 325865 CGACGGGGCGGTTGCGCATGTTGCTGCGGCGCGCCGTCTCCACAGGGTAGTAGTTGCGGT 325806 Query 65898 CGATAATGCGATTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAAT 65957 | |||| ||||||| |||||| || | | ||| | ||| | | | || | Sbjct 325805 CAATAACCCGATTCAGATTGCGCGTGATC---TGC----TTTGTCACGGTG--TAGAGAA 325755 Query 65958 CAAAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATG 66017 || || | || ||| | | || | || || || || || | ||| | Sbjct 325754 GCTGGTGGTT-GAAC--TCGCGCTTCTCGATGTCGACGAAGCGAGGCAGCGCGATAGAGG 325698 Query 66018 CGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGAT 66077 | ||||| || || || |||| || || | || ||||| ||||| |||||||||| || Sbjct 325697 CAAGGTTACACACGGCCGTCTCCTCCGGCGACGTGTACTCCACAATCTCGGTGCACAAAT 325638 Query 66078 TACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGT 66137 | ||| || || || | |||| || || ||||| ||||| || ||||||| Sbjct 325637 TCGAGCACTTGATCGTACCGAGGTTCTTCTGGTTTGACTTGCTGTTGCACGCGTCCTTGT 325578 Query 66138 ACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGC 66197 ||| ||| |||| ||| ||||| | || ||||| | |||||| ||| | | Sbjct 325577 ACAAGATGAACGGCCCGCCCGTCTCGATCTGCGACTCCAGGATGGCAAACCACACCTCCT 325518 Query 66198 GTGCCTTCACCGTACGTACCGCCCTACCTTTGCGT-TCGTAATGTTCGTAGAGGTGTTCG 66256 | |||| | ||| | | |||| | | || ||||| | |||||||| | ||| Sbjct 325517 GCGCCTGAATCGT-CTTCACGCCGCGGCCCTCCGCCTCGTAGCGCTCGTAGAGTCGCTCG 325459 Query 66257 AAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAA 66316 || |||||| | ||| || | || ||| ||| || |||||||| ||| Sbjct 325458 AACTCTTCACCATAGCAGTCGCTGAGGCCCGGGCACGTGTTGGGGTCCATCAGCGTCCAC 325399 Query 66317 TCACCATC-CTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAG 66375 | || || || || |||||| ||| || | ||| || | ||| || || |||||||| Sbjct 325398 TTCCCCTCGCTCTT-TACACGCTTCATGAACAAATCTGGGACCCACAGCGCATAGAAGAG 325340 Query 66376 ATCGCGTGCTCGTTGCTCCTCAATGCC-GTGATTTTTGCGCA--AGTCG-AGGAACTCAA 66431 ||||| || ||||| || || |||| ||| |||||| || | | || ||| Sbjct 325339 GTCGCGAGCGCGTTGGTCATCTTTGCCCGTG----TTGCGCTTCAGCAGCAAAAAGCCAA 325284 Query 66432 AGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCAC 66491 ||| |||||| |||||||| || ||||||| |||||| | |||| | || |||||||| | Sbjct 325283 AGACGTCGGCGTGCCATGGCTCAAGGTAGACGGCGAAGGCGCCCTTGCGCTTGCCGCCGC 325224 Query 66492 CTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAG 66551 | ||||| |||||||| || ||||||||||| |||| |||||| ||||||||||| | Sbjct 325223 CCTGGTCCACGTAGCGGGCAGTGTTGTTGAAGACGCGCAGCATCGGCACGAGCCCGTTCG 325164 Query 66552 ATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGAC 66611 | |||||||||| ||| | ||| | ||| || || || | ||| || | ||| | Sbjct 325163 ACGTGCCATTGGTTCCGGCAATGTAGCTTCCAGCGGCGCGGATGTTGTGCACGTGCAGGC 325104 Query 66612 CAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGT 66671 | || || || |||| ||| ||| | || || || || || | | ||||||| Sbjct 325103 CGATGCCGCCAGCCGCCTTGCTGATCACGGCGCACTCCTTCAGCGTGTCGTAGATGCCGT 325044 Query 66672 CAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGG 66731 ||||| ||| |||| | || ||| |||| || || | ||| || || || ||| Sbjct 325043 CAATGCTGTCGTCCTTCGACGCCACCAGGAAGCACGAGCTCATTTGCGGCTTTGGGGTGC 324984 Query 66732 CGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAA 66769 |||| ||||||||| ||||| ||||| || ||| || Sbjct 324983 CGGCGTTGAAGAGGGTCGGTGTGGCGTGGGTGAAGAAA 324946 >seq15 Length=633270 Score = 188 bits (208), Expect = 6e-43 Identities = 594/902 (66%), Gaps = 25/902 (3%) Strand=Plus/Minus Query 61041 AGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTA 61100 |||||| || ||| | ||| | |||||||| ||||| | || || ||||||| ||| Sbjct 479893 AGAGAACCCGTTTCGCTACGTCCTCTTCCCCATTCAGTATCATGACATCTGGCGCAAGTA 479834 Query 61101 CAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAA 61160 ||| || |||| | | ||||||||||||||||| |||| | ||| |||||||| Sbjct 479833 CAAGGAGCAGGAAAGCTGCATCTGGACGGTGGAGGAGATCGACCTCGGCAACGACATGAA 479774 Query 61161 TGACTGGG-AGCGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCT 61219 ||||||| || | ||| ||| || | || ||||| || || ||| | || |||| Sbjct 479773 AGACTGGGTGGCACTGGACGA-CGGGGAGCGGCACTTCATCAAGCACGTGCTTGCCTTCT 479715 Query 61220 TTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGC 61279 | |||| ||||| || ||| ||||| | | | ||||| | || ||| Sbjct 479714 TCGCCGGGAGCGACGGCATTGTCGTCGAGAACCTTGCGCAGCGTTTTATGAGTGATGTGA 479655 Query 61280 AAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGG 61339 | ||| | |||||||| |||||||| |||||| | |||||||| ||||||||| Sbjct 479654 AGGTGCCAGAGGCGCGCGCGTTCTACGGGTTCCAGCTGATGATGGAGAACATCCACTCGG 479595 Query 61340 AGATGTACAGTGTTCTCATCGATACGTACAT--CAGGGAGCGGGCGGAACGTGAACGATT 61397 ||| |||| || || | || |||||||| ||| |||| | ||| || || | Sbjct 479594 AGACGTACTCGGTACTGCTGGACACGTACATCACAGACAGCGAGGAGAAGCTG--CGGCT 479537 Query 61398 GTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTG 61457 | | | || ||| ||||||| ||| | ||| ||| || || |||||| | || Sbjct 479536 GCTGCACGCGATCCAGACGATCCCGTGCATCAAGAAGAAGGCAGAGTGGGCCGTACGGTG 479477 Query 61458 GATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGG 61517 |||| || || | || | || || || || | | ||||| | ||| ||||| Sbjct 479476 GATCGGGAG--CAGC-GCGAGCTTCCAGGAGCGGCTGATCGGGTTTGCCGCGGTGGAGGG 479420 Query 61518 TGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCC 61577 | || || || || || ||| | || ||| ||||||| || || || ||||| Sbjct 479419 CATCTTCTTTTCGGGCTCATTCTGCGCGCTGTTCTGGCTGAAGAAGCGCGGCCTGATGCC 479360 Query 61578 CGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGC 61637 || || || || ||||| ||| | || || |||||||||||| | || || || || Sbjct 479359 GGGGCTAACGTTTAGCAACGAGCTCATCTCGCGCGACGAGGGCCTACACACGGACTTCGC 479300 Query 61638 -TG--TTTTGCTATTCAA-ACGC-TATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGT 61692 || | ||| | ||| ||| ||| || | | | ||| ||||| ||| Sbjct 479299 GTGCCTCTTG---TACAACTCGCACATCAGGCACAAGCTGCCTCG--CGAGCGCGTGCTG 479245 Query 61693 GAGATTGTTCGT-GAGGCGGTAACTATCGAACAGGAATT--TCTGACTGACGCTTTGCCC 61749 |||| | |||| || ||||| | ||||| | || || |||| ||||| |||| Sbjct 479244 GAGA-TCATCGTGGACGCGGTGAACATCGAGCGCGAGTTCATCTG--CGACGCGCTGCCG 479188 Query 61750 GTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGAC 61809 || ||| || |||||||| | | | ||| ||||||| || || || || || || Sbjct 479187 GTGCGACTGATTGGCATGAACTCGGAGTTGATGGCGCAGTACATCGAGTTCGTGGCGGAT 479128 Query 61810 CGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTC 61869 || ||| | ||| | ||| | || | ||| || ||| | ||||| || || Sbjct 479127 CGACTGCTCGTCTCGCTCGGTGAGGAGAAGCACTACAACGCGACGCAGCCATTCGACTTT 479068 Query 61870 ATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTAT 61929 ||||| ||||| |||||| | || |||||||| || |||||||| || ||||| || Sbjct 479067 ATGGAGATGATCTCGCTGCAGGGTAAGACGAACTTCTTCGAGAAGAAGGTGGGCGAGTAC 479008 Query 61930 CA 61931 || Sbjct 479007 CA 479006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397565601546800