Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20gerbilli_20[genbank_20GCA_5F000443025.1_202013-08-05] 492 sequences; 31,398,648 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq2 235 4e-57 seq76 226 2e-54 seq55 217 1e-51 >seq2 Length=1059033 Score = 235 bits (260), Expect = 4e-57 Identities = 519/770 (67%), Gaps = 10/770 (1%) Strand=Plus/Minus Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061 || || |||| || ||||||||||| || || |||| | || | || ||||||||| Sbjct 329676 GGCAGCGCAATGGAGGCGAGGTTGCACACCGCCGTCTCCTGCGGCGACGTGTACTCGACA 329617 Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121 || || ||||| || || ||| || ||||| | ||||| || || ||||| Sbjct 329616 ATCTCCGTGCATAGGTTCGAGCACTTGATCGTGCCAAGATTCTTCTGGTTCGACTTGCTG 329557 Query 66122 TTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181 |||||||| |||||||| | ||| |||| ||| ||||| | || ||||| | |||| Sbjct 329556 TTGCATGCGTCCTTGTAGAGGATGAACGGCCCGCCCGTCTCGATCTGCGACTCCAGGATG 329497 Query 66182 GCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCC-CTACCTTTGCGTTCGTAATG 66240 || ||| | | | |||| | ||| | | |||| | || | | ||||| | Sbjct 329496 GCAAACCACACCTCCTGGGCCTGGATCGT-CTTGACGCCGCGGCCCTCGGACTCGTAGCG 329438 Query 66241 TTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGG 66300 |||||||| | || || ||||| | ||| || | || ||| ||| || Sbjct 329437 CTCGTAGAGCCGCTCAAACTCCTCACCATAGCAATCGCTGAGGCCCGGGCACGTGTTGGG 329378 Query 66301 ACACATCAGCGACCAATCACCATC-CTGTTCTACACGACGCATAAATAGATCAGGTATCC 66359 | |||||||| ||| | || || || ||| ||||| | |||||| ||||| || |||| Sbjct 329377 ATCCATCAGCGTCCACTTCCCCTCGCTTTTC-ACACGCCTCATAAACAGATCTGGGATCC 329319 Query 66360 AGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCC-GTGATT--TTTGCGCA 66416 | || || |||||||| ||||| || || || || || | || ||| | ||| ||| Sbjct 329318 ACAGCGCATAGAAGAGGTCGCGGGCGCGCTGGTCATCTTTTCCCGTGTTGCGTTTCAGCA 329259 Query 66417 AGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCA 66476 || || |||||| |||||| ||||| || || || |||| ||| || | |||| Sbjct 329258 GC---AGAAAGCCAAAGACGTCGGCGTGCCAGGGCTCGAGATAGACGGCAAAGGCGCCCT 329202 Query 66477 TACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCG 66536 | || || |||||||| ||||| |||||||| ||| ||||||||||| || | ||| | Sbjct 329201 TGCGCTTACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTGTTGAAGACGCGTAGCATTG 329142 Query 66537 GTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATAT 66596 | ||||||||||| || |||| || || || | || | || || || || | Sbjct 329141 GCACGAGCCCGTTCGACGTGCCGTTCGTACCAGCTATATAGCTGCCCGCCGCGCGGATGT 329082 Query 66597 CGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTG 66656 ||| || | ||| |||||||| ||||||| || ||| | || || || || | Sbjct 329081 TGTGCACGTGCAGGCCAATACCGCCGGCCGCTTTGCTGATCACCGCGCACTCCTTCAGCG 329022 Query 66657 TCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTT 66716 | | | |||||||| ||| ||| |||| | || ||| |||| || || | || Sbjct 329021 TGTCGTAGATGCCGTCGATGCTGTCTTCCTTCGACGCCACCAGGAAGCACGAGCTCATTT 328962 Query 66717 GGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAG 66766 | || || || ||| |||| |||||||| || || ||||| || ||| Sbjct 328961 GCGGCTTCGGGGTGCCGGCGTTAAAGAGGGTCGGGGTGGCGTGGGTGAAG 328912 Score = 96.9 bits (106), Expect = 3e-15 Identities = 97/126 (77%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 65433 GGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATT 65492 ||||||||||| ||| || || ||||| |||||||| || |||| ||| || ||| | | Sbjct 330233 GGAACTCGCCGCTCAGCACGCGGCGGACGTAGATGTTCGAGGTGAAGGGCTCGAAGCACT 330174 Query 65493 CAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGT 65552 | ||||||| ||||| || | || || || ||||||||||| || |||| || |||| Sbjct 330173 CGTTGTTGCCGAGAATCTGCGAGGTGGACGCGGTTGGCATGGGGGCAACCAGCAGGGAGT 330114 Query 65553 TTCGCA 65558 | |||| Sbjct 330113 TGCGCA 330108 >seq76 Length=120750 Score = 226 bits (250), Expect = 2e-54 Identities = 605/904 (67%), Gaps = 23/904 (3%) Strand=Plus/Plus Query 61038 GCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCAT 61097 ||| ||||| || || | ||| | ||||| ||| |||| | || || ||||||| Sbjct 111311 GCAGGAGAACCCGTTCCGCTACGTCCTCTTCCCAATCCAGTACCATGACATCTGGCGCAA 111370 Query 61098 GTACAAAAAGGCGGA-AGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACA 61156 |||||| || ||| |||| | | |||||||||||||||| |||| || ||| |||| Sbjct 111371 GTACAAGGAGCAGGAGAGCTGCAT-CTGGACGGTGGAGGAGATCGACCTGGGCAACGACA 111429 Query 61157 TGAATGACTGGG-AGCGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCG 61215 |||| ||||||| | || | | ||| ||| || | || ||||| || |||||| | || Sbjct 111430 TGAAGGACTGGGCAACGCTGAACGA-CGGGGAGCGGCACTTCATCAAGCATGTGCTTGCC 111488 Query 61216 TTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAG 61275 ||||| |||| ||||| || |||| |||||| | | | || ||| | || Sbjct 111489 TTCTTCGCCGGCAGCGACGGCATAGTCATCGAGAATCTTGCGCAGCGCTTCATGAGCGAC 111548 Query 61276 GTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCAC 61335 ||| | ||| | |||||||| |||||||| |||||| | |||||||| ||||| Sbjct 111549 GTGAAGGTGCCAGAGGCGCGCGCGTTCTACGGGTTCCAGCTGATGATGGAGAACATCCAC 111608 Query 61336 TCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGG--AGCGGGCGGAACGTGAAC 61393 ||||||| |||| ||| || | || |||||||||| || |||| | ||| || | Sbjct 111609 TCGGAGACGTACTCTGTGCTGCTGGACACGTACATCACGGACAGCGAGGAGAAGCTG--C 111666 Query 61394 GATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCA 61453 | || | | || || ||||||| ||| | || ||| ||||| |||||| | Sbjct 111667 GGCTGCTGCACGCGATACAGACGATCCCGTGCATCCAGAAGAAGGCGGAGTGGGCCGTGC 111726 Query 61454 ATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCG 61513 |||||| || || | || | ||| || || || | | ||||| | ||| | Sbjct 111727 GGTGGATCGGGAG--CAGC-GCGAGCTTTCAGGAGCGGCTGATCGGCTTTGCCGCGGTGG 111783 Query 61514 AGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTA 61573 |||| | || || || ||||| ||| | || ||| ||||||| || || || | Sbjct 111784 AGGGCATTTTCTTTTCCGGGTCGTTCTGCGCGCTGTTCTGGCTGAAGAAGCGCGGTCTGA 111843 Query 61574 TGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATT 61633 |||| || ||||| |||||||| ||| | || || ||||||||||| | || || | Sbjct 111844 TGCCAGGGCTGACGTTCAGCAACGAGCTCATCTCGCGCGACGAGGGTCTACACACGGACT 111903 Query 61634 TTGCTGTTTTGCTATTCAA-ACGC-TATC-TGGTGAATCGTCCGTCGGAGGAGCGTGTGG 61690 | || |||| | ||| ||| ||| | || | ||| || ||||| ||| Sbjct 111904 TCGCATGCCTGCTGTACAACTCGCACATCAAGCACAAGCTGCCG-CG--CGAGCGCGTGC 111960 Query 61691 GTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATT--TCTGACTGACGCTTTGCC 61748 ||||| || || ||||| | ||||| | || || |||| ||||| |||| Sbjct 111961 TGGAGATCATTGTGGATGCGGTGAACATCGAGCGCGAGTTCATCTG--CGACGCGCTGCC 112018 Query 61749 CGTCTCACTCATCGGCATGAATTGTGGA-CTAATGTCGCAGTATATTGAATTTGTTGCCG 61807 || || || |||||||| | ||| || ||| ||||||| || || || || || | Sbjct 112019 GGTGCGGCTGATTGGCATGAA-CGCGGAGCTGATGGCGCAGTACATCGAGTTCGTCGCGG 112077 Query 61808 ACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATT 61867 |||| ||| |||| | || | || | ||| | ||| | || || |||| Sbjct 112078 ACCGGCTGCTGGTGTCGCTCGGCGAGGAGAAGCACTACCACTCGACGCAGCCGTTCGATT 112137 Query 61868 TCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACT 61927 ||||||| ||||| |||||| | ||||| ||||| || |||||||| | || || || | Sbjct 112138 TCATGGAGATGATCTCGCTGCAGGGCAAAACGAACTTCTTCGAGAAGAGGGTGGGGGAGT 112197 Query 61928 ATCA 61931 | || Sbjct 112198 ACCA 112201 >seq55 Length=202884 Score = 217 bits (240), Expect = 1e-51 Identities = 593/888 (67%), Gaps = 29/888 (3%) Strand=Plus/Minus Query 61038 GCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCAT 61097 ||| ||||| || || | ||| | ||||| ||| |||| | || || ||||||| Sbjct 180690 GCAGGAGAACCCGTTCCGCTACGTCCTCTTCCCAATCCAGTACCATGACATCTGGCGCAA 180631 Query 61098 GTACAAAAAGGCGGA-AGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACA 61156 |||||| || ||| |||| | | |||||||||||||||| |||| || ||| |||| Sbjct 180630 GTACAAGGAGCAGGAGAGCTGCAT-CTGGACGGTGGAGGAGATCGACCTGGGCAACGACA 180572 Query 61157 TGAATGACTGGG-AGCGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCG 61215 |||| ||||||| | || | | ||| ||| || | || ||||| || |||||| | || Sbjct 180571 TGAAGGACTGGGCAACGCTGAACGA-CGGGGAGCGGCACTTCATCAAGCATGTGCTTGCC 180513 Query 61216 TTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAG 61275 ||||| |||| ||||| || |||| |||||| | | | || ||| | || Sbjct 180512 TTCTTCGCCGGCAGCGACGGCATAGTCATCGAGAATCTTGCGCAGCGCTTCATGAGCGAC 180453 Query 61276 GTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCAC 61335 ||| | ||| | |||||||| |||||||| |||||| | |||||||| ||||| Sbjct 180452 GTGAAGGTGCCAGAGGCGCGCGCGTTCTACGGGTTCCAGCTGATGATGGAGAACATCCAC 180393 Query 61336 TCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA--GCGGGCGGAACGTGAAC 61393 ||||||| |||| ||| || | || |||||||||| ||| ||| | ||| || | Sbjct 180392 TCGGAGACGTACTCTGTGCTGCTGGACACGTACATCACGGACAGCGAGGAGAAGCTG--C 180335 Query 61394 GATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCA 61453 | || | | || || ||||||| ||| | || ||| ||||| |||||| | Sbjct 180334 GGCTGCTGCACGCGATACAGACGATCCCGTGCATCCAGAAGAAGGCGGAGTGGGCCGTGC 180275 Query 61454 ATTGGATC---ACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGG 61510 |||||| | |||| | | ||| || || || || | | ||||| | || Sbjct 180274 GGTGGATCGGGAGCAGTGCGA--GCT----TTCAGGAGCGGCTGATCGGCTTTGCCGCGG 180221 Query 61511 TCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGAC 61570 | ||||| | ||||| || ||||| ||| | || ||| ||||||| || || | Sbjct 180220 TGGAGGGCATTTTTTTTTCCGGGTCGTTCTGCGCGCTGTTCTGGCTGAAGAAGCGCGGTC 180161 Query 61571 TTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTG 61630 | ||||| || ||||| |||||||| ||| | || || ||||||||||| | || | Sbjct 180160 TGATGCCAGGGCTGACGTTCAGCAACGAGCTCATCTCGCGCGACGAGGGTCTACACACGG 180101 Query 61631 ATTTTGCTGTTTTGCTATTCAA-ACGC-TATC-TGGTGAATCGTCCGTCGGAGGAGCGTG 61687 | || || |||| | ||| ||| ||| | || | ||| || ||||| | Sbjct 180100 ACTTCGCATGCCTGCTGTACAACTCGCACATCAAGCACAAGCTGCCG-CG--CGAGCGCG 180044 Query 61688 TGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATT--TCTGACTGACGCTTT 61745 || |||||| || || ||||| | ||||| | || || |||| ||||| | Sbjct 180043 TGCTGGAGATTATTGTGGATGCGGTGAACATCGAGCGCGAGTTCATCTG--CGACGCGCT 179986 Query 61746 GCCCGTCTCACTCATCGGCATGAATTGTGGA-CTAATGTCGCAGTATATTGAATTTGTTG 61804 ||| || || || |||||||| | ||| | ||| ||||||| || || || || | Sbjct 179985 GCCGGTGCGGCTGATTGGCATGAA-CGCGGAGTTGATGGCGCAGTACATCGAGTTCGTCG 179927 Query 61805 CCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTG 61864 | ||||| ||| |||| | || | || | ||| | ||| | || || | Sbjct 179926 CGGACCGGCTGCTGGTGTCGCTCGGCGAGGAGAAGCACTACCACTCGACGCAGCCGTTCG 179867 Query 61865 ATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGA 61912 | |||||||| ||||| |||||| | ||||| || || || ||||||| Sbjct 179866 AATTCATGGAGATGATCTCGCTGCAGGGCAAAACAAACTTCTTCGAGA 179819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397565616082880