Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20gerbilli_20[genbank_20GCA_5F000443025.1_202013-08-05] 492 sequences; 31,398,648 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq32 98.7 4e-15 seq245 86.0 3e-11 >seq32 Length=321325 Score = 98.7 bits (108), Expect = 4e-15 Identities = 123/166 (74%), Gaps = 2/166 (1%) Strand=Plus/Plus Query 448987 CTCGAGCAACATGGCGTAGGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTC 449046 |||||||||| || || |||||||| ||| || | |||||||||||||| || || Sbjct 1520 CTCGAGCAACTTGCCGACCGTCATGCGACTGGGGAAGCCGTGCGGGTTCATGATCATATC 1579 Query 449047 GGGCGTCTCGCCGGCCGCGTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGAC 449106 ||| | |||| | ||||||||||||| || | || || | ||||||| ||| Sbjct 1580 GGGGCACATGCCGCGCTCGTTGAAGGGCATATCGACTCCATTCACAATCAGGCCGACGAC 1639 Query 449107 GCCCTTCTGGCCGTGGCG-GCTGCAGAACTTGTCCCCCTGCTCGGG 449151 ||||||||| ||||| || | || |||||||||| ||| | || || Sbjct 1640 GCCCTTCTGTCCGTGACGTGATG-AGAACTTGTCACCCGGTTCTGG 1684 >seq245 Length=3395 Score = 86.0 bits (94), Expect = 3e-11 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 449006 GTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCGGGCGTCTCGCCGGCCGCG 449065 |||||||| || || ||| || ||||| ||||||| ||| ||| |||| | | Sbjct 3035 GTCATGCGGGAGGGAATGGCGTGGGGGTTGATGATGAGGTCCGGCACGATGCCGTCGCGG 2976 Query 449066 TTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGCGG 449125 ||||||||||||||||| || | | | ||||||| |||||| || ||||| ||| Sbjct 2975 TTGAAGGGCATGTCCTCCTGGCGAAACTGGATGCCGTTGGTGCCCTTTTGTCCGTGCCGG 2916 Query 449126 CTGCAGAACTTGTCCCC 449142 ||||| |||||||| || Sbjct 2915 CTGCAAAACTTGTCGCC 2899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084725737796616