Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20sp._20MAR_20LEM2494_20[genbank_20GCA_5F000409445.2_2020 16-05-17] 251 sequences; 30,813,970 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq31 86.0 3e-11 >seq31 Length=625104 Score = 86.0 bits (94), Expect = 3e-11 Identities = 175/256 (68%), Gaps = 7/256 (3%) Strand=Plus/Plus Query 449006 GTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCGGGCGTCTCGCCGGCCGCG 449065 |||||||| ||||| || || ||||| ||||||| ||| || ||| | | Sbjct 12247 GTCATGCGAGACGGAATCGCGTGGGGGTTGATGATGAGGTCTGGTACGATGCCATCGCGG 12306 Query 449066 TTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGCGG 449125 || |||||||||||||| || | | | ||||||| ||| ||||| ||||||||| Sbjct 12307 TTAAAGGGCATGTCCTCTTGGCGAAACTGAATGCCGTTGGTGCCTTTCTGCCCGTGGCGG 12366 Query 449126 CTGCAGAACTTGTC-CCCCTGCTCGGGCTTGCGTG-TGAAGCGCAGCACGATCTTGATGG 449183 |||||||||||||| || || | ||| | | || || ||| | || |||| || Sbjct 12367 CTGCAGAACTTGTCGCCGATGTTGGGGAT--CTTGATGGTGCGAATTTTGACCTTGGTGA 12424 Query 449184 AGCGGAAGCCGTCCCTGTTGGTGGTGTCGATGACCGACTCCACGACGGCGTCGTCGGTGC 449243 ||||| ||||| |||| |||| || ||| ||||||||| | | || ||| Sbjct 12425 AGCGGTCGCCGT---TGTTCATGGTCAGCATCACCTTGTCCACGACGCCTTTCTCCGTGT 12481 Query 449244 CGCGGTAGATGGTGCT 449259 |||| || || |||| Sbjct 12482 TGCGGGAGGTGATGCT 12497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084732332087298