Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20turanica_20[genbank_20GCA_5F000441995.1_202013-07-29] 336 sequences; 32,320,007 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq2 232 5e-56 seq33 219 3e-52 seq72 217 1e-51 >seq2 Length=1084633 Score = 232 bits (256), Expect = 5e-56 Identities = 511/758 (67%), Gaps = 10/758 (1%) Strand=Plus/Plus Query 66014 GATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCAC 66073 || ||||||||||| || || |||| | || | || ||||||||||| || ||||| Sbjct 752400 GAGGCGAGGTTGCACACCGCCGTCTCCTGCGGCGACGTGTACTCGACAATCTCCGTGCAT 752459 Query 66074 AGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCC 66133 || || ||| || ||||| | ||||| || || ||||| |||||||| ||| Sbjct 752460 AGGTTCGAGCACTTGATCGTGCCAAGATTCTTCTGGTTCGACTTGCTGTTGCATGCGTCC 752519 Query 66134 TTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGA 66193 ||||| | ||| |||| ||| ||||| | || ||||| | |||||| ||| | Sbjct 752520 TTGTAGAGGATGAACGGCCCGCCCGTCTCGATCTGCGACTCCAGGATGGCAAACCACACC 752579 Query 66194 GCGCGTGCCTTCACCGTACGTACCGCC-CTACCTTTGCGTTCGTAATGTTCGTAGAGGTG 66252 | | |||| | ||| | | |||| | || | | ||||| | |||||||| | Sbjct 752580 TCCTGGGCCTGGATCGT-CTTGACGCCGCGGCCCTCGGACTCGTAGCGCTCGTAGAGCCG 752638 Query 66253 TTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGA 66312 || || ||||| | ||| || | || ||| ||| ||| |||||||| Sbjct 752639 CTCAAACTCCTCACCATAGCAATCGCTGAGGCCCGGGCACGTGTTGGGATCCATCAGCGT 752698 Query 66313 CCAATCACCATC-CTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGA 66371 ||| | || || || ||| ||||| | |||||| ||||| || ||||| || || |||| Sbjct 752699 CCACTTCCCCTCGCTTTTC-ACACGCCTCATAAACAGATCTGGGATCCACAGCGCATAGA 752757 Query 66372 AGAGATCGCGTGCTCGTTGCTCCTCAATGCC-GTGATT--TTTGCGCAAGTCGAGGAACT 66428 |||| ||||| || || || || || | || ||| | ||| ||| || || Sbjct 752758 AGAGGTCGCGGGCGCGCTGGTCATCTTTTCCCGTGTTGCGTTTCAGCAGC---AGAAAGC 752814 Query 66429 CAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGC 66488 |||||| |||||| ||||| || || || |||| ||| || | |||| | || || |||| Sbjct 752815 CAAAGACGTCGGCGTGCCAGGGCTCGAGATAGACGGCAAAGGCGCCCTTGCGCTTACCGC 752874 Query 66489 CACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGT 66548 |||| ||||| |||||||| ||| ||||||||||| || | ||| || |||||||||| Sbjct 752875 CACCCTGGTCCACGTAGCGGGCGGTGTTGTTGAAGACGCGTAGCATTGGCACGAGCCCGT 752934 Query 66549 TAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCA 66608 | || |||| || || || | ||| | || || || || | ||| || | || Sbjct 752935 TCGACGTGCCGTTCGTACCAGCTATGTAGCTGCCCGCCGCGCGGATGTTGTGCACGTGCA 752994 Query 66609 GACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGC 66668 | ||||| || ||||||| || ||| | || || || || || | | |||| Sbjct 752995 GGCCAATGCCGCCGGCCGCTTTGCTGATCACCGCGCACTCCTTCAGGGTGTCGTAGATGC 753054 Query 66669 CGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTG 66728 |||| ||| ||| |||| | || ||| |||| || || | ||| || || || | Sbjct 753055 CGTCGATGCTGTCTTCCTTCGACGCCACCAGGAAGCACGAGCTCATTTGCGGCTTCGGGG 753114 Query 66729 TGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAG 66766 || |||| |||||||| || || ||||| || ||| Sbjct 753115 TGCCGGCGTTAAAGAGGGTCGGGGTGGCGTGGGTGAAG 753152 Score = 102 bits (112), Expect = 6e-17 Identities = 98/126 (78%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 65433 GGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATT 65492 ||||||||||| ||| ||||| ||||| |||||||| || |||| ||| || ||| | | Sbjct 751831 GGAACTCGCCGCTCAGCACACGGCGGACGTAGATGTTCGAGGTGAAGGGCTCGAAGCACT 751890 Query 65493 CAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGT 65552 | ||||||| ||||| || | || || || ||||||||||| || |||| || |||| Sbjct 751891 CGTTGTTGCCGAGAATCTGCGAGGTGGACGCGGTTGGCATGGGGGCAACCAGCAGGGAGT 751950 Query 65553 TTCGCA 65558 | |||| Sbjct 751951 TGCGCA 751956 >seq33 Length=364854 Score = 219 bits (242), Expect = 3e-52 Identities = 594/886 (67%), Gaps = 25/886 (3%) Strand=Plus/Minus Query 61038 GCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCAT 61097 ||| ||||| || || | ||| | ||||| ||| |||| | || || ||||||| Sbjct 191028 GCAGGAGAACCCGTTCCGCTACGTCCTCTTCCCAATCCAGTACCATGACATCTGGCGCAA 190969 Query 61098 GTACAAAAAGGCGGA-AGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACA 61156 |||||| || ||| |||| | | |||||||||||||||| |||| || ||| |||| Sbjct 190968 GTACAAGGAGCAGGAGAGCTGCAT-CTGGACGGTGGAGGAGATCGACCTGGGCAACGACA 190910 Query 61157 TGAATGACTGGG-AGCGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCG 61215 |||| ||||||| | || | | ||| ||| || | || ||||| || |||||| | || Sbjct 190909 TGAAGGACTGGGCAACGCTGAACGA-CGGGGAGCGGCACTTCATCAAGCATGTGCTTGCC 190851 Query 61216 TTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAG 61275 ||||| |||| ||||| || |||| |||||| | | | || ||| | || Sbjct 190850 TTCTTCGCCGGCAGCGACGGCATAGTCATCGAGAATCTTGCGCAGCGCTTCATGAGCGAC 190791 Query 61276 GTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCAC 61335 ||| | ||| | |||||||| |||||||| |||||| | |||||||| ||||| Sbjct 190790 GTGAAGGTGCCAGAGGCGCGCGCGTTCTACGGGTTCCAGCTGATGATGGAGAACATCCAC 190731 Query 61336 TCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGG--AGCGGGCGGAACGTGAAC 61393 ||||||| |||| ||| || | || |||||||||| || |||| | ||| || | Sbjct 190730 TCGGAGACGTACTCTGTGCTGCTGGACACGTACATCACGGACAGCGAGGAGAAGCTG--C 190673 Query 61394 GATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCA 61453 | || | | || || ||||||| ||| | || ||| ||||| |||||| | Sbjct 190672 GGCTGCTGCACGCGATACAGACGATCCCGTGCATCCAGAAGAAGGCGGAGTGGGCCGTGC 190613 Query 61454 ATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCG 61513 |||||| || || | || | ||| || || || | | ||||| | ||| | Sbjct 190612 GGTGGATCGGGAG--CAGC-GCGAGCTTTCAGGAGCGGCTGATCGGCTTTGCCGCGGTGG 190556 Query 61514 AGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTA 61573 |||| | || || || ||||| ||| | || ||| ||||||| || || || | Sbjct 190555 AGGGCATTTTCTTTTCCGGGTCGTTCTGCGCGCTGTTCTGGCTGAAGAAGCGCGGTCTGA 190496 Query 61574 TGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATT 61633 |||| || ||||| |||||||| ||| | || || ||||||||||| | || || | Sbjct 190495 TGCCAGGGCTGACGTTCAGCAACGAGCTCATCTCGCGCGACGAGGGTCTACACACGGACT 190436 Query 61634 TTGCTGTTTTGCTATTCAA-ACGC-TATC-TGGTGAATCGTCCGTCGGAGGAGCGTGTGG 61690 | || |||| | ||| ||| ||| | || | ||| || ||||| ||| Sbjct 190435 TCGCATGCCTGCTGTACAACTCGCACATCAAGCACAAGCTGCCG-CG--CGAGCGCGTGC 190379 Query 61691 GTGAGATTGTTCGT-GAGGCGGTAACTATCGAACAGGAATT--TCTGACTGACGCTTTGC 61747 |||||| |||| || ||||| | ||||| | || || |||| ||||| ||| Sbjct 190378 TGGAGATT-ATCGTGGATGCGGTGAACATCGAGCGCGAGTTCATCTG--CGACGCGCTGC 190322 Query 61748 CCGTCTCACTCATCGGCATGAATTGTGGA-CTAATGTCGCAGTATATTGAATTTGTTGCC 61806 | || || || |||||||| | ||| || ||| ||||||| || || || || || Sbjct 190321 CGGTGCGGCTGATTGGCATGAA-CGCGGAGCTGATGGCGCAGTACATCGAGTTCGTCGCG 190263 Query 61807 GACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGAT 61866 ||||| ||| |||| | || | || | ||| | ||| | || || || Sbjct 190262 GACCGGCTGCTGGTGTCGCTCGGCGAGGAGAAGCACTACCACTCGACGCAGCCGTTCGAA 190203 Query 61867 TTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGA 61912 |||||||| ||||| |||||| | ||||| || || || ||||||| Sbjct 190202 TTCATGGAGATGATCTCGCTGCAGGGCAAAACAAACTTCTTCGAGA 190157 >seq72 Length=122406 Score = 217 bits (240), Expect = 1e-51 Identities = 605/905 (67%), Gaps = 25/905 (3%) Strand=Plus/Plus Query 61038 GCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCAT 61097 ||| ||||| || || | ||| | ||||| ||| |||| | || || ||||||| Sbjct 112311 GCAGGAGAACCCGTTCCGCTACGTCCTCTTCCCAATCCAGTACCATGACATCTGGCGCAA 112370 Query 61098 GTACAAAAAGGCGGA-AGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACA 61156 |||||| || ||| |||| | | |||||||||||||||| |||| | ||| |||| Sbjct 112371 GTACAAGGAGCAGGAGAGCTGCAT-CTGGACGGTGGAGGAGATCGACCTAGGCAACGACA 112429 Query 61157 TGAATGACTGGG-AGCGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCG 61215 |||| ||||||| | || | | ||| ||| || | || ||||| || |||||| | || Sbjct 112430 TGAAGGACTGGGCAACGCTGAACGA-CGGGGAGCGGCACTTCATCAAGCATGTGCTTGCC 112488 Query 61216 TTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAG 61275 ||||| |||| ||||| || |||| |||||| | | | || ||| | || Sbjct 112489 TTCTTCGCCGGCAGCGACGGCATAGTCATCGAGAATCTTGCGCAGCGCTTCATGAGCGAC 112548 Query 61276 GTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCAC 61335 ||| | ||| | |||||||| |||||||| |||||| | |||||||| ||||| Sbjct 112549 GTGAAGGTGCCAGAGGCGCGCGCGTTCTACGGGTTCCAGCTGATGATGGAGAACATCCAC 112608 Query 61336 TCGGAGATGTACAGTGTTCTCATCGATACGTACAT--CAGGGAGCGGGCGGAACGTGAAC 61393 ||||||| |||| ||| || | || |||||||| ||| |||| | ||| || | Sbjct 112609 TCGGAGACGTACTCTGTGCTGCTGGACACGTACATCACAGACAGCGAGGAGAAGCTG--C 112666 Query 61394 GATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCA 61453 | || | | || || ||||||| ||| | || ||| ||||| |||||| | Sbjct 112667 GGCTGCTGCACGCGATACAGACGATCCCGTGCATCCAGAAGAAGGCGGAGTGGGCCGTGC 112726 Query 61454 ATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCG 61513 |||||| || || | || | ||| || || || | | ||||| | ||| | Sbjct 112727 GGTGGATCGGGAG--CAGC-GCGAGCTTTCAGGAGCGGCTGATCGGCTTTGCCGCGGTGG 112783 Query 61514 AGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTA 61573 |||| | || || || ||||| ||| | || ||| ||||||| || || || | Sbjct 112784 AGGGCATTTTCTTTTCCGGGTCGTTCTGCGCGCTGTTCTGGCTGAAGAAGCGCGGTCTGA 112843 Query 61574 TGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATT 61633 |||| || ||||| |||||||| ||| | || || ||||||||||| | || || | Sbjct 112844 TGCCAGGGCTGACGTTCAGCAACGAGCTCATCTCGCGCGACGAGGGTCTACACACGGACT 112903 Query 61634 TTGCTGTTTTGCTATTCAA-ACGC-TATC-TGGTGAATCGTCCGTCGGAGGAGCGTGTGG 61690 | || |||| | ||| ||| ||| | || | ||| || ||||| ||| Sbjct 112904 TCGCATGCCTGCTGTACAACTCGCACATCAAGCACAAGCTGCCG-CG--CGAGCGCGTGC 112960 Query 61691 GTGAGATTGTTCGT-GAGGCGGTAACTATCGAACAGGAATT--TCTGACTGACGCTTTGC 61747 |||||| |||| || ||||| | ||||| | || || |||| ||||| ||| Sbjct 112961 TGGAGATT-ATCGTGGATGCGGTGAACATCGAGCGCGAGTTCATCTG--CGACGCGCTGC 113017 Query 61748 CCGTCTCACTCATCGGCATGAATTGTGGA-CTAATGTCGCAGTATATTGAATTTGTTGCC 61806 | || || || |||||||| | ||| || ||| ||||||| || || || || || Sbjct 113018 CGGTGCGGCTGATTGGCATGAA-CGCGGAGCTGATGGCGCAGTACATCGAGTTCGTCGCG 113076 Query 61807 GACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGAT 61866 ||||| ||| |||| | || | || | ||| | ||| | ||||| || Sbjct 113077 GACCGGCTGCTGGTGTCGCTCGGCGAGGAGAAGCACTACCACTCGACGCAGCCATTCGAC 113136 Query 61867 TTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGAC 61926 |||||||| ||||| || ||| | ||||| ||||| || |||||||| | || || || Sbjct 113137 TTCATGGAGATGATCTCTCTGCAGGGCAAAACGAACTTCTTCGAGAAGAGGGTGGGGGAG 113196 Query 61927 TATCA 61931 || || Sbjct 113197 TACCA 113201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397566371959040