Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptomonas_20seymouri_20[genbank_20GCA_5F001299535.1_202015-09-25] 1,216 sequences; 27,764,161 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq486 374 3e-101 >seq486 Length=10014 Score = 374 bits (414), Expect = 3e-101 Identities = 302/363 (83%), Gaps = 4/363 (1%) Strand=Plus/Plus Query 178 CTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGC 237 ||||||| |||||||| |||| | | || ||||||||||| |||||| || Sbjct 2369 CTTCATTCGATAAGTAAAGCAACGTTCCGAGTGGTGGTATTTCATTTGCGCTTGC---GC 2425 Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 | |||| ||| ||||||||| | ||| ||| || | |||| ||||||| |||||| Sbjct 2426 TTCCACCTATACTACACCTCAGATGTCGCCGTACAGAGCCAGACTGGAGTCAAACTCAAC 2485 Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 ||||||||||||||||||| | || |||| ||||||||||| |||| ||||||||||| Sbjct 2486 AGGGTCTTCTTTCCCCGCTTAGCCCTTCAAGTCCGTTCCCTTGACTGTCGTTTCGCTAGA 2545 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 ||||| | ||||||| ||||||||| |||||||||||||||||||| |||||| || || Sbjct 2546 TAGTAACTCGGGACAGAGGGAATCTCATTAATCCATTCATGCGCGTCTCTAATTGGAAGA 2605 Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct 2606 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCGTCGG 2665 Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCA-ACATCA 536 ||||| || |||| ||||||||||||||||||||||||||||| ||||| || ||| || Sbjct 2666 TGAATCTCGTCACGTTGACATTCAGAGCACTGGGCAGAAATCAGTTTGCGACATACACCA 2725 Query 537 CTT 539 ||| Sbjct 2726 CTT 2728 Score = 111 bits (122), Expect = 5e-22 Identities = 90/108 (83%), Gaps = 1/108 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| || ||||| ||||||||||||| | |||| |||||||||||||||||| | Sbjct 2015 CTTGTGTTCTACGTGAGATTTCTGTTCCCACTGAGCTTGCCTTAGGACACCTGCGTTGTC 2074 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACA-ATGTC 113 || |||||||| ||||||||||||||||||||||| ||| || ||||| Sbjct 2075 GTGTAACAGATATGCCGCCCCAGCCAAACTCCCCATCTGGCAGATGTC 2122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635180115968