Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptomonas_20seymouri_20[genbank_20GCA_5F001299535.1_202015-09-25] 1,216 sequences; 27,764,161 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq31 257 1e-63 seq14 223 3e-53 seq24 109 4e-19 >seq31 Length=128647 Score = 257 bits (284), Expect = 1e-63 Identities = 1125/1745 (64%), Gaps = 64/1745 (4%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 || |||||||||| |||||||| ||||||||||| || | || ||||||| |||||| Sbjct 108945 TCCACCGTGAACTTGATCGCATCGGCAGCCGCCTTCGTGCGCAGGTAGTACACACCGGTC 108886 Query 65138 TTGAGGCCAGCACGCCAAGCA-TAGAAATGCATCGATGATAATTTTGC-ATAATTCGGCT 65195 ||||||||| ||| || || |||||| ||||||| | | || | || | | | || | Sbjct 108885 TTGAGGCCA-CACTCCCAGGTGTAGAAAAGCATCGACG-TGATCTGGCCAGAGGTGGGGT 108828 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 || || |||| |||||| || || ||||| |||| || || |||| Sbjct 108827 TCTGCAGGAACAGGTTCAGCGACTGCGATTGGTCAATGTACTGACCGCGGTCGCGGGCCA 108768 Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACC-TCA 65314 |||| || | || | |||||||| ||||| ||| || | | || || Sbjct 108767 TGTCGATCAGCTTGCGCTGAGGGATCTCCCACACGGTGCGGTAGAG-CTCCTTAAGGTCT 108709 Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATC 65374 || || | || || | || || || | | |||||| ||| |||||| Sbjct 108708 TGGGGGATGCCGTCGATAGACAAGATAGACCCGTTTAGGGTAATAATTTCATTGCGCATC 108649 Query 65375 GACTCTGACCACAAACCCAAATCGATAAGATGTTGAAC-CAAGTGACGA-TTGATGACTT 65432 | ||| ||||| || | ||| || || | | | || || |||| || Sbjct 108648 GTCTCGTTCCACAGTCCGCGCTTGATGAG--GTCCATCACGAGATACTTGTTGACCACCG 108591 Query 65433 GGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATT 65492 ||||||||||| ||| ||||| || || |||||||||||||||| ||| || ||| | | Sbjct 108590 GGAACTCGCCGCTCAGCACACGGCGCACGTAGATGTTGGACGTGAAGGGCTCGAAGCACT 108531 Query 65493 CAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGT 65552 | ||||||| ||||| || | || || || || ||||| || || | || | |||| Sbjct 108530 CGTTGTTGCCGAGAATCTGCGAGGTGGACGCTGTCGGCATCGGGGCCAGCAGAAGGGAGT 108471 Query 65553 TTCGCAATCCGTTC---ATTTCAATGTTGT-GACGCAATTCGTCCCAGTTCCACATCGGT 65608 | |||| ||| || || | | | | || || |||||||| ||| ||| Sbjct 108470 TGCGCATACCGGTCTGCATCACCTTCTCCTTGAGGCT----GTCCCAGTCCCAG--CGGC 108417 Query 65609 TTATCGTCGACATCCACGGG-----CCACATATCCTGTTGCAGGGTTCCGATACTGGCCG 65663 | ||| | ||| |||||| || ||||| | || ||||||| Sbjct 108416 CACTGTTCGGG---CGGGGGTTCTTCCACATGTCGAACTGCAGAATGCCCTGGCTGGCCG 108360 Query 65664 GTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTG-ACAGCTGGTCTCG 65722 | || ||| | |||||| | ||||||||||| || | | | || || ||| Sbjct 108359 GGCTGCCCTTGAAGGTCTCGTACGCGCCCTCCTCCTTCGCCATCTCCATAGATGC-CTCC 108301 Query 65723 AGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCG-ATTAAGTTCACGTGCCTCATCGCT 65781 | |||||||| || || ||||| || || | || ||| | | ||||| |||| Sbjct 108300 ACCGCGGCAAAGTAGATCGTCTCAAAGAT-CTCCGCATTCACCCGCTGCGCCTCGGCGCT 108242 Query 65782 CTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGAT 65841 | | | |||| || || ||| | || | ||| ||||| || || || || | || || Sbjct 108241 CACAAAAGGCAGACGCAGCAGAATGAACGCGTCTGCCAGGCCCTGCACACCGAGGCCAAT 108182 Query 65842 GGGACGATGACGCAAATTGGAACGTCTCGCC---TCAGGTACAGGGTAGTAATTGATATC 65898 ||| || | |||| ||| || |||| ||| || |||||||| ||| || Sbjct 108181 GGGGCGGTTGCGCATGTTGCTGCGAAGCGCCGTCTCA---ACGGGGTAGTAGTTGCGGTC 108125 Query 65899 GATAATGCGATTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAATC 65958 ||| | || |||| |||||||| | | ||| | ||| || | || | | | Sbjct 108124 GATCACACGGTTCAGGTTGCGTGTGATC---TGC----TTCGTGACAGT-GT---AGAGC 108076 Query 65959 AAAATGTTTAGGACGATCGGGAGTGCCGGACA--CCACAAACTTGGGAAGGGCAAGAGAT 66016 | ||| | ||||| | || | || || ||| || || | || Sbjct 108075 AGCTTGT---GATCGATCTCACGCTTCGCCTCGTCGACGAAGCGGGGTAGCGCGATGGAG 108019 Query 66017 GCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGA 66076 || |||||||| || || |||| || || | ||| ||||| || || || || ||||| Sbjct 108018 GCAAGGTTGCACACGGCGGTCTCCTCCGGCGAGGTGTACTCAACTATCTCCGTACACAGG 107959 Query 66077 TTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTG 66136 || ||| |||||||| | |||| || || ||||| ||||| || |||||| Sbjct 107958 TTCGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCCGTTGCACGCGTCCTTG 107899 Query 66137 TACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCG 66196 |||| ||| |||| ||| ||||||| || ||||| | ||| ||| ||| | | Sbjct 107898 TACAGGATGAACGGCACGCCCGTCTCAATCTGCGACTCGAGGATAGCGAACCACACCTCC 107839 Query 66197 CGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCG 66256 | |||| | || | || | | || | ||||| | || || ||| | ||| Sbjct 107838 TGCGCCTGAATAGTCTGCACGCCACGGCCCTCCGCCTCGTAGCGCTCATATAGGCGCTCG 107779 Query 66257 AAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAA 66316 || || || | || || | ||||| || || |||||||| ||| Sbjct 107778 AACTCCTCGCCGTAGCAGTCACTCAAGCCCGGACAGGCGTTCGGGTCCATCAGCGTCCAC 107719 Query 66317 TCACCATC-CTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAG 66375 | || || || ||| ||||| ||| || || || || | ||| ||||||||||| || Sbjct 107718 TTCCCTTCGCTCTTC-ACACGCTTCATGAACAGGTCGGGGACCCACAGGGCGTAGAACAG 107660 Query 66376 ATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCA--AGTCG-AGGAACTCAAA 66432 ||| || || || || || || ||||| | |||||| || | || || |||| Sbjct 107659 ATCACGCGCACGCTGGTCGTCCTTGCCGG---TGTTGCGCTTCAGGAGCAGAAAACCAAA 107603 Query 66433 GATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACC 66492 ||||||||| ||||| || |||||||| | |||||| | ||| | || || || ||||| Sbjct 107602 GATGTCGGCGTGCCACGGCTCCAGGTACACGGCGAAAGCACCCTTGCGCTTACCACCACC 107543 Query 66493 TTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGA 66552 ||||| |||||||| ||| |||||||| ||||||| ||||||||| | ||||| || Sbjct 107542 CTGGTCCACGTAGCGGGCGGTGTTGTTGAACACACGCAGCATCGGTACCAATCCGTTCGA 107483 Query 66553 TTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACC 66612 |||| || |||||| | ||| | ||| || || |||| ||| || | ||| || Sbjct 107482 CGTGCCGTTCGTGCCGGCAATGTAGCTTCCAGCAGCGCGGATATTGTGCACGTGCAGGCC 107423 Query 66613 AATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTC 66672 ||| || || |||| || |||| | ||||| || || || | | |||||||| Sbjct 107422 AATGCCGCCCGCCGCTTTGCTGATGACGGCACACTCCTTCAGGGTGTCGTAAATGCCGTC 107363 Query 66673 AATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGC 66732 ||| ||| |||| |||| || | | |||| || || | || || || || ||| | Sbjct 107362 GATGCTGTCGTCCTTCATGGCCACCAAGAAGCACGAGCTCATCTGCGGCTTCGGCGTGCC 107303 Query 66733 GGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGC-GAGACATGTAATTGTACG 66791 ||| ||||||||| || || |||||||| ||| ||| | ||||| | | ||||| Sbjct 107302 GGCGTTGAAGAGGGTTGGCGTGGCGTGCGTGAAG-AATCCCTTCGACATCAATTCGTACG 107244 Query 66792 TCTCG 66796 ||||| Sbjct 107243 TCTCG 107239 >seq14 Length=160581 Score = 223 bits (246), Expect = 3e-53 Identities = 592/880 (67%), Gaps = 27/880 (3%) Strand=Plus/Plus Query 61064 TGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGA-AGCTTCCTTC 61122 ||||||| |||| || | ||||| ||||||| |||||| || ||| |||| | | | Sbjct 142904 TGTTCCCGATCGTATACCACGATATCTGGCGCAAGTACAAGGAGCAGGAGAGCTGCAT-C 142962 Query 61123 TGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGC-GTTTATCGAG 61181 |||||| |||||||| |||| || ||| |||||||| ||||||||| ||| | ||| Sbjct 142963 TGGACGCTGGAGGAGATCGACCTGGGCAACGACATGAAGGACTGGGAGAAGTTAAACGA- 143021 Query 61182 CGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGT 61241 ||| || | || ||||| || || || | || || ||||| | ||||| ||||| Sbjct 143022 CGGCGAGCGGCACTTCATCAAGCACGTCCTTGCTTTTTTTGCAGGGAGCGACGGCATCGT 143081 Query 61242 CAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTT 61301 || ||||| | | | || ||| | || ||| | ||| |||||||||| || Sbjct 143082 CATCGAGAACCTCGCGCAGCGCTTCATGACCGACGTGAAGGTGCCGGAGGCGCGCGCCTT 143141 Query 61302 CTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGA 61361 ||||||||||||| | |||||||| |||||||||||| |||| || || | || Sbjct 143142 CTACGGCTTCCAGTTGATGATGGAGAACATCCACTCGGAGACGTACTCGGTGCTGCTTGA 143201 Query 61362 TACGTACATCAGGG--AGCGGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATA 61419 |||||||||| || |||| | ||| || || || | | || ||| ||||||| Sbjct 143202 CACGTACATCACGGACAGCGAGGAGAAGCTG--CGGCTGCTGCACGCAATCCAGACGATC 143259 Query 61420 CCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACA 61479 ||| || || ||| ||||| ||||| | ||||||| || | | || | Sbjct 143260 CCGTGCGTTCAGAAGAAGGCGGAGTGGGCTGTGCGTTGGATCGGGAG--CCGC-GCGAGC 143316 Query 61480 TTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTT 61539 || || || || | | || || | ||| ||||| |||| ||| || ||||| Sbjct 143317 TTCCAGGAGCGGCTGATCGGCTTCGCCGCGGTTGAGGGCATATTCTTCTCCGGGTCGTTC 143376 Query 61540 GCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAG 61599 ||| | || ||| ||||||| || || || |||||||| |||||||||||||| ||| Sbjct 143377 TGCGCGCTGTTCTGGCTGAAGAAGCGCGGGCTGATGCCCGGGCTGACCTTCAGCAACGAG 143436 Query 61600 TTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTC-AAACGC-T 61657 | || || || ||||||||| |||| || || || | || | | | ||| Sbjct 143437 CTCATCTCGCGTGACGAGGGCCTGCACACGGACTTCGCGTGCCTCCTCTACGACTCGCAC 143496 Query 61658 ATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGT-GAGGCGGTAACT 61716 ||| | | | | || ||||| || |||| | |||| || ||||| | Sbjct 143497 ATCAAGCACAAGCTGCCCCG--TGAGCGCGTTCTGGAGA-TCATCGTGGACGCGGTGAAC 143553 Query 61717 ATCGAACAGGAATT--TCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTG 61774 || || | || || |||| ||||| |||| || | |||||||||| | | Sbjct 143554 ATTGAGCGCGAGTTCATCTG--CGACGCGCTGCCTGTGCGGTTGGTCGGCATGAA-CGCG 143610 Query 61775 GA-CTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTG-TTG-GTCGATTTGGGTA 61831 || || ||||||||||| || || ||||| || ||||| ||| ||| |||| |||| Sbjct 143611 GACCTGATGTCGCAGTACATCGAGTTTGTGGCGGACCGGCTGCTTGTGTCG--CTGGGGC 143668 Query 61832 TGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATG 61891 | || | ||| || || | || || || |||||||| ||||| |||||| | | Sbjct 143669 TCGAGAAGCACTACAACGTGACGCAGCCGTTCGACTTCATGGAGATGATCTCGCTGCAAG 143728 Query 61892 GCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTATCA 61931 |||||||||| || |||||||| || || || ||||| Sbjct 143729 GCAAGACGAACTTCTTCGAGAAGAAGGTCGGTGAGTATCA 143768 >seq24 Length=140537 Score = 109 bits (120), Expect = 4e-19 Identities = 294/438 (67%), Gaps = 14/438 (3%) Strand=Plus/Plus Query 61501 TTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAG 61560 || || | ||| ||||| |||| || || ||||| ||| | || ||| ||||| Sbjct 114 TTCGCTGCGGTAGAGGGCATATTCTTTTCGGGGTCGTTCTGCGCGCTGTTCTGGCTGAAG 173 Query 61561 AAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGC 61620 || || || || |||||||| |||||||||||||| ||| | || || || ||||||||| Sbjct 174 AAGCGCGGGCTGATGCCCGGGCTGACCTTCAGCAACGAGCTCATCTCGCGTGACGAGGGC 233 Query 61621 ATGCATTGTGATTTTGCTGTTTTGCTATTCAAA-CGCT-ATCTGGTGAATCGTCCGTCGG 61678 |||| || ||||| |||| | | | ||| ||| | | | | || Sbjct 234 CTGCACACGGACTTTGCGTGCCTGCTCTACGACTCGCACATCAAGCACAAGCTGCCCCGT 293 Query 61679 AGGAGCGTGTGGGTGAGATTGTTCGTG-AGGCGGTAACTATCGAACAGGAATT--TCTGA 61735 ||||| || ||||| | |||| | || || | || || | || || |||| Sbjct 294 --GAGCGCGTTCTGGAGATCAT-CGTGGATGCAGTGAACATTGAGCGCGAGTTCATCTGC 350 Query 61736 CTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTG 61795 ||||| |||| || || ||||||||||| || ||| ||||||||||| || | Sbjct 351 --GACGCGCTGCCTGTGCGGCTGATCGGCATGAACGCTGAACTGATGTCGCAGTACATCG 408 Query 61796 AATTTGTTGCCGACCGTCTG-TTG-GTCGATTTGGGTATGAAGCGGATCTATAATACGAA 61853 | ||||| || ||||| ||| ||| |||| | ||| | || | ||| || | Sbjct 409 AGTTTGTGGCAGACCGGCTGCTTGTGTCGCT--GGGGCTCGAGAAGCACTACAACGTGGC 466 Query 61854 AAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAA 61913 | || || || |||||||| ||||| |||||| | ||||||||||| || |||||||| Sbjct 467 GCAGCCGTTCGACTTCATGGAGATGATCTCGCTGCAAGGCAAGACGAACTTCTTCGAGAA 526 Query 61914 ACGTGTAGGCGACTATCA 61931 || || || ||||| Sbjct 527 GAAGGTCGGTGAGTATCA 544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397562108042240