Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Perkinsela_20sp._20CCAP_201560_2F4_20[genbank_20GCA_5F001235845.1_20 2015-08-05] 693 sequences; 9,477,801 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq295 102 1e-19 seq213 102 1e-19 seq181 102 1e-19 seq95 102 1e-19 seq94 102 1e-19 >seq295 Length=62094 Score = 102 bits (112), Expect = 1e-19 Identities = 83/101 (82%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 158 GGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATG 217 |||||||| ||||| ||||| ||||| |||||||||| |||| || || | |||||||| Sbjct 40640 GGTCTCGTCCGTTAAAGGAATCAACCAAACAAATCACTTCACCGACCAAAAGCGGCCATG 40581 Query 218 CACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||| | | |||||||||||| ||||||| ||||| Sbjct 40580 CACCACCGTCAAACGAATCAAGAAAGGGCTATCAGCCTGTC 40540 >seq213 Length=77040 Score = 102 bits (112), Expect = 1e-19 Identities = 83/101 (82%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 158 GGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATG 217 |||||||| ||||| ||||| ||||| |||||||||| |||| || || | |||||||| Sbjct 75344 GGTCTCGTCCGTTAAAGGAATCAACCAAACAAATCACTTCACCGACCAAAAGCGGCCATG 75285 Query 218 CACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||| | | |||||||||||| ||||||| ||||| Sbjct 75284 CACCACCGTCAAACGAATCAAGAAAGGGCTATCAGCCTGTC 75244 >seq181 Length=22678 Score = 102 bits (112), Expect = 1e-19 Identities = 83/101 (82%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 158 GGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATG 217 |||||||| ||||| ||||| ||||| |||||||||| |||| || || | |||||||| Sbjct 21405 GGTCTCGTCCGTTAAAGGAATCAACCAAACAAATCACTTCACCGACCAAAAGCGGCCATG 21346 Query 218 CACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||| | | |||||||||||| ||||||| ||||| Sbjct 21345 CACCACCGTCAAACGAATCAAGAAAGGGCTATCAGCCTGTC 21305 >seq95 Length=35521 Score = 102 bits (112), Expect = 1e-19 Identities = 83/101 (82%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 158 GGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATG 217 |||||||| ||||| ||||| ||||| |||||||||| |||| || || | |||||||| Sbjct 34262 GGTCTCGTCCGTTAAAGGAATCAACCAAACAAATCACTTCACCGACCAAAAGCGGCCATG 34203 Query 218 CACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||| | | |||||||||||| ||||||| ||||| Sbjct 34202 CACCACCGTCAAACGAATCAAGAAAGGGCTATCAGCCTGTC 34162 >seq94 Length=35646 Score = 102 bits (112), Expect = 1e-19 Identities = 83/101 (82%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 158 GGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATG 217 |||||||| ||||| ||||| ||||| |||||||||| |||| || || | |||||||| Sbjct 1251 GGTCTCGTCCGTTAAAGGAATCAACCAAACAAATCACTTCACCGACCAAAAGCGGCCATG 1310 Query 218 CACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||| | | |||||||||||| ||||||| ||||| Sbjct 1311 CACCACCGTCAAACGAATCAAGAAAGGGCTATCAGCCTGTC 1351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796794650733