Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Perkinsela_20sp._20CCAP_201560_2F4_20[genbank_20GCA_5F001235845.1_20
2015-08-05] 693 sequences; 9,477,801 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq376 241 2e-61
seq295 241 2e-61
seq122 241 2e-61
seq65 241 2e-61
seq37 241 2e-61
>seq376
Length=54760
Score = 241 bits (266), Expect = 2e-61
Identities = 176/203 (87%), Gaps = 1/203 (0%)
Strand=Plus/Minus
Query 36 AGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGT 95
||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |
Sbjct 2062 AGTAGGGTAAAACCAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTCATCC- 2004
Query 96 GGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCG 155
||||||||||||| || ||| || | |||| || | | ||||||||||||||||||
Sbjct 2003 GGGTGAACAATCCGACCCTTTGCGTCTGCTGCGGCGCAAGGCTAGGAAGAGCCGACATCG 1944
Query 156 AAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTG 215
|||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1943 AAGGATCAAACGGCAACGTCGCTAGGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTG 1884
Query 216 GTAACTTTTCTGGCACCTCTAGC 238
|||| |||| || ||||||| ||
Sbjct 1883 GTAATTTTTATGACACCTCTGGC 1861
>seq295
Length=62094
Score = 241 bits (266), Expect = 2e-61
Identities = 176/203 (87%), Gaps = 1/203 (0%)
Strand=Plus/Minus
Query 36 AGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGT 95
||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |
Sbjct 44193 AGTAGGGTAAAACCAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTCATCC- 44135
Query 96 GGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCG 155
||||||||||||| || ||| || | |||| || | | ||||||||||||||||||
Sbjct 44134 GGGTGAACAATCCGACCCTTTGCGTCTGCTGCGGCGCAAGGCTAGGAAGAGCCGACATCG 44075
Query 156 AAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTG 215
|||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 44074 AAGGATCAAACGGCAACGTCGCTAGGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTG 44015
Query 216 GTAACTTTTCTGGCACCTCTAGC 238
|||| |||| || ||||||| ||
Sbjct 44014 GTAATTTTTATGACACCTCTGGC 43992
>seq122
Length=470851
Score = 241 bits (266), Expect = 2e-61
Identities = 176/203 (87%), Gaps = 1/203 (0%)
Strand=Plus/Minus
Query 36 AGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGT 95
||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |
Sbjct 2062 AGTAGGGTAAAACCAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTCATCC- 2004
Query 96 GGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCG 155
||||||||||||| || ||| || | |||| || | | ||||||||||||||||||
Sbjct 2003 GGGTGAACAATCCGACCCTTTGCGTCTGCTGCGGCGCAAGGCTAGGAAGAGCCGACATCG 1944
Query 156 AAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTG 215
|||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1943 AAGGATCAAACGGCAACGTCGCTAGGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTG 1884
Query 216 GTAACTTTTCTGGCACCTCTAGC 238
|||| |||| || ||||||| ||
Sbjct 1883 GTAATTTTTATGACACCTCTGGC 1861
>seq65
Length=9442
Score = 241 bits (266), Expect = 2e-61
Identities = 176/203 (87%), Gaps = 1/203 (0%)
Strand=Plus/Minus
Query 36 AGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGT 95
||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |
Sbjct 1127 AGTAGGGTAAAACCAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTCATCC- 1069
Query 96 GGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCG 155
||||||||||||| || ||| || | |||| || | | ||||||||||||||||||
Sbjct 1068 GGGTGAACAATCCGACCCTTTGCGTCTGCTGCGGCGCAAGGCTAGGAAGAGCCGACATCG 1009
Query 156 AAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTG 215
|||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1008 AAGGATCAAACGGCAACGTCGCTAGGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTG 949
Query 216 GTAACTTTTCTGGCACCTCTAGC 238
|||| |||| || ||||||| ||
Sbjct 948 GTAATTTTTATGACACCTCTGGC 926
>seq37
Length=44803
Score = 241 bits (266), Expect = 2e-61
Identities = 176/203 (87%), Gaps = 1/203 (0%)
Strand=Plus/Plus
Query 36 AGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGT 95
||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |
Sbjct 44375 AGTAGGGTAAAACCAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTCATCC- 44433
Query 96 GGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCG 155
||||||||||||| || ||| || | |||| || | | ||||||||||||||||||
Sbjct 44434 GGGTGAACAATCCGACCCTTTGCGTCTGCTGCGGCGCAAGGCTAGGAAGAGCCGACATCG 44493
Query 156 AAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTG 215
|||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 44494 AAGGATCAAACGGCAACGTCGCTAGGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTG 44553
Query 216 GTAACTTTTCTGGCACCTCTAGC 238
|||| |||| || ||||||| ||
Sbjct 44554 GTAATTTTTATGACACCTCTGGC 44576
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854394079008
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