Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20francai_20[genbank_20GCA_5F001766655.1_202016-10-14] 96 sequences; 17,721,985 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq33 141 3e-31 seq2 80.6 8e-13 >seq33 Length=1536331 Score = 141 bits (156), Expect = 3e-31 Identities = 118/143 (83%), Gaps = 1/143 (1%) Strand=Plus/Minus Query 73 ATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCC 132 |||||| ||||||||||||||||||| ||| | || |||||||| |||||||||||||| Sbjct 266190 ATTGGGCAATTTGCGCGCCTGCTGCCCTCCGTAGAAGTGGTAGCTATTTCTCAGGCTCCC 266131 Query 133 TCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCT 192 ||||||||||||||||||||| ||||| | ||||| | |||||| || |||||| | Sbjct 266130 TCTCCGGAATCGAACCCTAATCCCCCGCT-CCCGTCAACGCCATGGCAGTCCACTACACG 266072 Query 193 ACCATCGAAAGTTGATAGGGCAG 215 ||||| | ||||||||||| Sbjct 266071 GCCATCACTGGCTGATAGGGCAG 266049 Score = 80.6 bits (88), Expect = 8e-13 Identities = 78/97 (80%), Gaps = 5/97 (5%) Strand=Plus/Minus Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAG-ATTGCTTATACTTAGACATGCAT 467 ||||| ||||||||||| ||||| ||| ||| | | | || || || || ||||||| Sbjct 265828 CTGATGTAATGAGCCATGCGCAGATTC-CTGCAATGCAGTGATT---CTGAGGCATGCAT 265773 Query 468 GGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||| | || |||| |||||||||||||||||||||| Sbjct 265772 GGCTAAGTCCTTGAAACAAGCATATGACTACTGGCAG 265736 >seq2 Length=630681 Score = 80.6 bits (88), Expect = 8e-13 Identities = 78/97 (80%), Gaps = 5/97 (5%) Strand=Plus/Plus Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAG-ATTGCTTATACTTAGACATGCAT 467 ||||| ||||||||||| ||||| ||| ||| | | | || || || || ||||||| Sbjct 59 CTGATGTAATGAGCCATGCGCAGATTC-CTGCAATGCAGTGATT---CTGAGGCATGCAT 114 Query 468 GGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||| | || |||| |||||||||||||||||||||| Sbjct 115 GGCTAAGTCCTTGAAACAAGCATATGACTACTGGCAG 151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510398550016