Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20francai_20[genbank_20GCA_5F001766655.1_202016-10-14] 96 sequences; 17,721,985 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq22 132 2e-25 seq1 87.8 7e-12 >seq22 Length=1603200 Score = 132 bits (146), Expect = 2e-25 Identities = 336/501 (67%), Gaps = 19/501 (4%) Strand=Plus/Plus Query 448662 CGCGCTCCATGTCGCCCAATCGGAGCCCGCCGTGTCGCAACTTGCCCTCGGTGGGCTGCC 448721 |||||||||| ||||| | || || |||||| ||| ||||||||||||||| | Sbjct 602291 CGCGCTCCATCTCGCCGACGCGCAGGCCGCCGCTGCGCGCGCGGCCCTCGGTGGGCTGTC 602350 Query 448722 GCGTGAGGAGCGAGTACGGTCCCCTCTGCCGCGTGTGCATCTTCTCCGAGGCCAGTTGCT 448781 | ||||| | |||| ||| || || |||| ||||||||| || | ||| |||| Sbjct 602351 GGGTGAGCATCGAGCGCGGCCCGGTCGCGCGCGCGTGCATCTTGTCGGTCACCATATGCT 602410 Query 448782 TGAGGCTCTGGAAGAAGAAGGGCGCGTAGAACATGCGGCACGGCATCATCTCGCCCGTCT 448841 | || | ||| | ||| ||| || |||| | | || ||||||| |||||| || Sbjct 602411 TTAGCCGCTGATAATAGAGGGGGCCGAAGAAGACGAAGCCCGGCATCGCCTCGCCGCTCA 602470 Query 448842 GGCCGTCCGTA-AAGATCGTCTTGCCCTCGGGCTCGATCATGCCCCTCTCCTCCATGTAG 448900 |||| ||| |||| |||||| | | | | | ||||| | | | | | Sbjct 602471 CGCCGGA-GTAGAAGAGGTCCTTGCCGTGG---TAGCTGCAGCCCCGCGCGAGGAGGCGG 602526 Query 448901 TCCATGAGCTCGGCCACGGAGAGGTCC---GAAAAGGCCGTGCCGTC-CTG---CGGCA- 448952 ||| |||| ||| | |||| | || || |||||||| | | || | Sbjct 602527 CGGCCGAG---GGCCTCGGCGGGGTCGCCGGCGAACGCGGTGCCGTCGCCGACCCGCCCG 602583 Query 448953 AGCCGCTCTCACAGCC--CGTGATGGCCTGGAGGGCCTCGAGCAACATGGCGTAGGTCAT 449010 |||| | | ||| ||| || | || || | |||||||| | || || |||||| Sbjct 602584 AGCC-CGCCCACGGCCGCCGCCTTCGCGCAGACGAGCTCGAGCAGCTTGCCGACGGTCAT 602642 Query 449011 GCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCGGGCGTCTCGCCGGCCGCGTTGAA 449070 ||| |||| || | || ||||||||||| ||||| || || |||| | ||||||| Sbjct 602643 GCGGCTCGGGAAGCCGTGGGGGTTCATGATCATGTCCGGGCTCATGCCGAGCTCGTTGAA 602702 Query 449071 GGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGCGGCTGCA 449130 ||||||||| ||| || | | | || ||| |||||| ||||||||||||||| | | Sbjct 602703 GGGCATGTCGACGGCGTCGGCGATGAGCCCGACGACGCCTTTCTGGCCGTGGCGGGAGGA 602762 Query 449131 GAACTTGTCCCCCTGCTCGGG 449151 ||||||||| ||| |||| || Sbjct 602763 GAACTTGTCGCCCGGCTCCGG 602783 >seq1 Length=634488 Score = 87.8 bits (96), Expect = 7e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 349073 GCGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCG 349132 |||| || ||||| ||| | ||| | |||| |||| | |||| || |||||| || Sbjct 477961 GCGTTGATGATCTCGACGAGGCGGGGGACGCCCTGGGTGATGTTCATGCTCGCGACCCCC 477902 Query 349133 GCAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCG 349192 || |||||||||||| | ||||||| ||||||| |||||||||| | ||||| | ||| Sbjct 477901 GCGAAGTGGAAGGTCCGCAGGGTCATCTGCGTGCTCGGCTCGCCGACGGACTGGGCGGCG 477842 Query 349193 A 349193 | Sbjct 477841 A 477841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084736573228608