Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20sp._20isolate_20EM1_20[genbank_20GCA_5F000582765.1_2020 14-02-26] 138 sequences; 17,780,869 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq80 129 2e-27 >seq80 Length=6135 Score = 129 bits (142), Expect = 2e-27 Identities = 101/121 (83%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 563 CTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCT 622 ||||| ||||||||||| |||||||||||||||||| | ||||||||| | |||||| | Sbjct 5161 CTGTTTGGACCCGAAAGGTGGTGAACTATGCCTGAACAAGGTGAAGCCCGGGGAAACCCA 5220 Query 623 GGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCG 682 ||||||||| | |||| | ||| ||||||||||| |||| |||||||||| || ||| Sbjct 5221 GGTGGAGGCCTGTAGCGATGCTGACGTGCAAATCGCTCGTATGATTTGGGTATCGGAGCG 5280 Query 683 A 683 | Sbjct 5281 A 5281 Score = 107 bits (118), Expect = 8e-21 Identities = 108/137 (79%), Gaps = 4/137 (3%) Strand=Plus/Plus Query 49 TGTTTGGGAATGCAGC-TCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCA 107 ||||||||||||||| || | ||| ||||| | ||| | |||| |||||| | | Sbjct 4619 TGTTTGGGAATGCAGTGTCAAGTTGGCAGGTATTTGTCTGCCAAAGTTAAATACAGAGTA 4678 Query 108 G--AGACCGATAGCGCACAAGTAGAGTGATCGAAAGAT-GAAAAGCACTTTGGAAAGAGA 164 | |||||||||||| |||||||| |||| |||||| | ||||||||||||||||||||| Sbjct 4679 GGAAGACCGATAGCGGACAAGTAGCGTGAGCGAAAGTTTGAAAAGCACTTTGGAAAGAGA 4738 Query 165 GTTAAAAAGCACGTGAA 181 || | | || || |||| Sbjct 4739 GTGACATAGAACCTGAA 4755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079997039900