Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20sp._20isolate_20EM1_20[genbank_20GCA_5F000582765.1_2020 14-02-26] 138 sequences; 17,780,869 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq27 253 7e-65 >seq27 Length=181239 Score = 253 bits (280), Expect = 7e-65 Identities = 219/271 (81%), Gaps = 3/271 (1%) Strand=Plus/Minus Query 178 CTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGC 237 ||||||| ||||| || |||| | | || ||||||||||| |||||| || Sbjct 154056 CTTCATTCGATAAGTGAAGCAACGTTCCGAGTGGTGGTATTTCATTTGCGCTTGC---GC 154000 Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 | |||| ||| ||||||||| | ||| |||| || | |||| ||||||| |||||| Sbjct 153999 TTCCACCTATACTACACCTCAGATGTCGCCGCACAGAGCCAGACTGGAGTCAAACTCAAC 153940 Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 ||||||||||||||||||| | || |||| ||||||||||| |||| ||||||||||| Sbjct 153939 AGGGTCTTCTTTCCCCGCTTAGCCCTTCAAGTCCGTTCCCTTGACTGTCGTTTCGCTAGA 153880 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 ||||| | ||||||| ||||||||| |||||||||||||||||||| |||||| || || Sbjct 153879 TAGTAACTCGGGACAGAGGGAATCTCATTAATCCATTCATGCGCGTCTCTAATTGGAAGA 153820 Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATA 448 |||||||||||||||||||||| | |||||| Sbjct 153819 CGAGGCATTTGGCTACCTTAAGGGGGTCATA 153789 Score = 89.7 bits (98), Expect = 2e-15 Identities = 62/69 (90%), Gaps = 1/69 (1%) Strand=Plus/Minus Query 46 CCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTG 105 |||||||||||||||||| | || |||||||| ||||||||||||||||||||||| ||| Sbjct 154321 CCTTAGGACACCTGCGTTGTCGTGTAACAGATATGCCGCCCCAGCCAAACTCCCCATCTG 154262 Query 106 ACA-ATGTC 113 || ||||| Sbjct 154261 GCAGATGTC 154253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635197743424