Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20sp._20isolate_20Hart1_20[genbank_20GCA_5F000982615.1_20 2014-03-12] 84 sequences; 18,129,152 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq43 141 3e-31 >seq43 Length=12995 Score = 141 bits (156), Expect = 3e-31 Identities = 118/143 (83%), Gaps = 1/143 (1%) Strand=Plus/Minus Query 73 ATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCC 132 |||||| ||||||||||||||||||| ||| | || |||||||| |||||||||||||| Sbjct 5319 ATTGGGCAATTTGCGCGCCTGCTGCCCTCCGTAGAAGTGGTAGCTATTTCTCAGGCTCCC 5260 Query 133 TCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCT 192 ||||||||||||||||||||| ||||| | ||||| | |||||| || |||||| | Sbjct 5259 TCTCCGGAATCGAACCCTAATCCCCCGCT-CCCGTCAACGCCATGGCAGTCCACTACACG 5201 Query 193 ACCATCGAAAGTTGATAGGGCAG 215 ||||| | ||||||||||| Sbjct 5200 GCCATCACTGGCTGATAGGGCAG 5178 Score = 80.6 bits (88), Expect = 8e-13 Identities = 78/97 (80%), Gaps = 5/97 (5%) Strand=Plus/Minus Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAG-ATTGCTTATACTTAGACATGCAT 467 ||||| ||||||||||| ||||| ||| ||| | | | || || || || ||||||| Sbjct 4957 CTGATGTAATGAGCCATGCGCAGATTC-CTGCAATGCAGTGATT---CTGAGGCATGCAT 4902 Query 468 GGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||| | || |||| |||||||||||||||||||||| Sbjct 4901 GGCTAAGTCCTTGAAACAAGCATATGACTACTGGCAG 4865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510398731264