Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20culicis_20[genbank_20GCA_5F000442495.1_202013-07-31] 12,772 sequences; 27,283,778 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq12768 75.2 2e-11 seq10962 75.2 2e-11 >seq12768 Length=9284 Score = 75.2 bits (82), Expect = 2e-11 Identities = 87/116 (75%), Gaps = 1/116 (1%) Strand=Plus/Minus Query 197 GGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGA 256 || |||||||||| | ||| || | |||||||||||||||||| || || ||||| Sbjct 7131 GGGTAGTCGGGGGAGAACGTACTCGAGCGTCAGAGGTGAAATTCTTAGACCGATCGAAGA 7072 Query 257 CTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 | |||||| ||| | || ||| ||||||| ||| | ||||| |||| ||||| Sbjct 7071 CGAACTACAGCGGAGGCATTCTTCAAGGATACCTTCCTCAATCA-AGAACCAAAGT 7017 >seq10962 Length=6782 Score = 75.2 bits (82), Expect = 2e-11 Identities = 87/116 (75%), Gaps = 1/116 (1%) Strand=Plus/Minus Query 197 GGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGA 256 || |||||||||| | ||| || | |||||||||||||||||| || || ||||| Sbjct 5000 GGGTAGTCGGGGGAGAACGTACTCGAGCGTCAGAGGTGAAATTCTTAGACCGATCGAAGA 4941 Query 257 CTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 | |||||| ||| | || ||| ||||||| ||| | ||||| |||| ||||| Sbjct 4940 CGAACTACAGCGGAGGCATTCTTCAAGGATACCTTCCTCAATCA-AGAACCAAAGT 4886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915083110656