Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strigomonas_20culicis_20[genbank_20GCA_5F000482145.1_202013-10-25] 3,002 sequences; 23,587,153 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1162 149 2e-33 seq33 80.6 8e-13 >seq1162 Length=3924 Score = 149 bits (164), Expect = 2e-33 Identities = 121/144 (84%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 73 ATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCC 132 |||||| ||||||||||||||||||| ||| | || |||||||| |||||||||||||| Sbjct 2184 ATTGGGCAATTTGCGCGCCTGCTGCCCTCCGTAGAAGTGGTAGCTATTTCTCAGGCTCCC 2243 Query 133 TCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCT 192 ||||||||||||||||||||||||||| | ||||| | |||||| || |||||| | Sbjct 2244 TCTCCGGAATCGAACCCTAATTCCCCGCT-CCCGTCAACGCCATGGCAGTCCACTACACG 2302 Query 193 ACCATCGA-AAGTTGATAGGGCAG 215 ||||| | || ||||||||||| Sbjct 2303 GCCATCAACCAGCTGATAGGGCAG 2326 Score = 80.6 bits (88), Expect = 8e-13 Identities = 78/97 (80%), Gaps = 5/97 (5%) Strand=Plus/Plus Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAG-ATTGCTTATACTTAGACATGCAT 467 ||||| ||||||||||| ||||| ||| ||| | | | || || || || ||||||| Sbjct 2573 CTGATGTAATGAGCCATGCGCAGATTC-CTGCAGTGCAGTGATT---CTGAGGCATGCAT 2628 Query 468 GGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||| | || |||| |||||||||||||||||||||| Sbjct 2629 GGCTAAGTCCTTGAAACAAGCATATGACTACTGGCAG 2665 >seq33 Length=61665 Score = 80.6 bits (88), Expect = 8e-13 Identities = 74/91 (81%), Gaps = 2/91 (2%) Strand=Plus/Plus Query 124 CAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGC 183 |||||||||||||||||||||||||||||||||||| | ||||| | |||||| || | Sbjct 23443 CAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGCT-CCCGTCAACGCCATGGCAGTC 23501 Query 184 CACTATCCTACCATCGA-AAGTTGATAGGGC 213 ||||| | ||||| | || ||| ||||| Sbjct 23502 CACTACACGGCCATCAACCAGCTGACAGGGC 23532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510354657792